[pdbjlvh2]Protein Model on 5z8y_A_1_P

Protein Model on 5z8y_A_1_P_1 (TEMPLATE: 5z8y )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [328 aa]	Leucine-rich repeat transmembrane neuronal protein 2 :LRRT2_HUMAN
2	b		P 1 (A)	non-polymer(ZN)	ZINC ION	502E(H) 518A(H) (identity: 0.0 %/33.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5z8y_A_1 identity=33.0%

queryA       493:IFFIGPNQFENLP---DIACLNLSANSNAQV-LSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKV: 588
                : *      *   *   *   * **   *    *    *        * *  *        *   *  *  * ** *   *     *    * *   **  :
5z8y_A_1      11:LFYCDSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNK-IFYLPNTT----FTQ-LINLQN: 104
SecStr          :EEE TTS  SS    S    SEEE TTS   EE TTTTSS TT SEEE  S    EE TTTTTT TT  EEE  SS -     TTT----TTT- TT  E:    
ExpBur          :ebebeeeebeebbebeeeebebbbbeebebeebeeebbebbeebebbebbebebeebeeebbebbeebeebbbbebe-beebbeeb----bee-beebeb:    
Contact         :         b                  b                                                                       

queryA       589:LNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFP: 688
                :* ** *    *          *  *    * *              *     *  **** ***       *  *   * ***   * *   *      * :
5z8y_A_1     105:LDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTI-------PVRLFWDCRSLEFLDLSTNRLRSLARNGFAGL-IKLRELHLEHNQLTKINFA---HFL: 193
SecStr          :EE  SS      TTTTTT TT  EEE  S      ------- TTTTTT TT  EEE  SS      TTTTTT -TT  EEE  SS   EEEGG---GGT:    
ExpBur          :bbbbebebeebeeebbebbeebeebebeebebeeb-------beebbebbebbebbbbbebebeebeeebbbeb-eebeebbbbebebeebebb---ebe:    

queryA       689:RLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLE--------------------: 768
                :**                     *** ** *  * ** *  *       *  ***  *  * *     **    *                         :
5z8y_A_1     194:RL---------------------SSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLRSLTT: 272
SecStr          :T --------------------- S  EEE  SS   EEE SS    TT  EEE TTS   EE TTTTTS TT  EEE  SS      HHHHTT  S SE:    
ExpBur          :eb---------------------eebebbbbbebebeebbbeeebebeebeebbbbbbebeebeeebbebbeebeebbbbebebebbeeebbebbeebeb:    

queryA       769:--LHGNPFECTCDIGDFRRWMD------EHLNVKIPRLVDVICASPGDQRGKSIV: 815
                :  * **  **   *     *        **            * **    *  * :
5z8y_A_1     273:VGLSGNLWECSARICALASWLGSFQGRWEH---------SILCHSPDHTQGEDIL: 318
SecStr          :EE TTS  B SGGGHHHHHHHHH  SEESS---------  B  BSGGGTTSBHH:    
ExpBur          :bbbbebebebeeebeebbebbeebeeeeee---------ebebeeeeebeeeebe:

Protein Model on 5z8y_A_1_P_1 (TEMPLATE: 5z8y )

Input Residue Numbers for Focused Sites