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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | A 1 (C) | polymer(polypeptide(L)) [893 aa] | Membrane-localized LRR receptor-like protein :A0A2I8B6R1_NICBE | |
2 | b | O 1 (C) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 394P(Q) 419N (identity: 50.0 %/31.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7w3x_A_1 identity=31.4% |
queryA 143:GLPESLTELSLIQ--NNIYNITKEGI--SRLINLKNLYLAWNCYFNKVCEKTNIE---------------------DGVFETLTNLELLSLSFNSLSHVP: 217 :***** ** ** * * * * ** * ** ** * * * * * : 7w3x_A_1 449:GLPESMGQLSNLESFDASYNVLKGTITESHLSNLSSL-VDLDLSFNSLALKTSIDWLPPFQLQVINLPSCNLGPSFPKWLQSQNNYTVLDISLANISDAL: 547 SecStr : GGGGG SS EEE SS S B GGGGSS TT - EEE S S BB SS S SEEE TT B SS GGGTT SEEE TT SB : ExpBur :bbbeebbebeebebbbbbebebeeebeeebbeebeeb-bbbbbbebebbbeeeeeeebebebebbbbbebebbeebbebbeebeebbbbbbbebebeeeb: queryA 218:PK----LPSSLRKLFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFA------FQNLTQLRYLNLSSTSL--------: 299 :* ** * *** ** *** * * * * ** * * * *** : 7w3x_A_1 548:PSWFSGLPPDIKILNLSNNQISGRVSDLIENAYDYMVIDLSSNN---FSGPLPLVP------TNVQIFYLHKNQFFGSISSICKSTTGATSLDLSHNQFS: 638 SecStr : TT SS EEE SS EE TTS SS EEE SSE---E SS ------SS SEEE SS EEE TTSSSS B SEEE SSEEE: ExpBur :beebeebbeebbbbbbbebebeeebeebbeebeebbbbbbbebe---bebebbebb------eebebbbbeebebeeebeebbeeebebbbbbbbebebe: queryA 300:RKINAAWFKNMPHLKVLDLEFNYLVGEIASG---------------AFLTMLPRL------EILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYV: 378 : * * * ** * * * * *** * **** * * * * ** ** * ** : 7w3x_A_1 639:GELPDCWM-NATNLAVLNLAYNNFSGKLPQSLGSLTNLEALYMRQNSFSGMLPSLSQCQSLQILDLGGNKLTGRIPAWIG-----TDLLNLRILSLR---: 729 SecStr :S TTGG-GB S EEE SS SB GGGGG TT EEE SS BEE TT S EEE TTS EEEE THHH-----HS TT EEE T---: ExpBur :bebbebbe-ebeebbbbbbbbbebebebbebbbebeebebbbbbebebebebbebeebeebbbbbbbebebebebbebbb-----eebeebbbbbbb---: queryA 379:FQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQ: 478 :* ** * * * * * * * ** * ** * ** : 7w3x_A_1 730:FNKFYGSISPIICQLQFLQILDLSANGLAG---KIPQCFNNFTLLH-QENGLGEPMEFLVQGFY--GKYPRHYSYLGNLLVQWKNQEAEYK--NPL----: 817 SecStr :TSEEES GGGGGGSS EEE SS EE--- S GGG STTT-SSS EEEEEEE -- SS EEEEEEEHHHHHHHHHTTT --SS ----: ExpBur :ebebebebeeebbebeebbbbbbbebebee---ebbebbeebebbe-eeeeeeeebebebebeb--eebeeebeeebebbebbeebbeeee--eee----: Contact : b b queryA 479:CAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANS-NAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTH: 575 : * * *** * * **** * * * *** * * * * ***** * ** * : 7w3x_A_1 818:--TYLKTIDLSSNKLVGGIPKEMAEMRGLKSLNLSRNDLNGSIIKG--IGQMKMLESLDLSRNQLSGMIPKDLANLTFIGVLDLSNNHLSGRIPSSTQ: 911 SecStr :-- SSEEE SSEE S TTSTT S EEE SS EE TT--GGG S EEE SSEEEE GGGGG EEE SBEE S TT: ExpBur :--ebebbbbbbebebeeebbeebbebebbebbebbebebeeebbee--beebebbebbebbebebeeebbeebeebeebeebbbbebebebeebebee: |