Protein Model on 3wpc_A_1_L_1 (TEMPLATE: 3wpc )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR8_HUMAN) A 1 (A) polymer(polypeptide(L)) [747 aa] Toll-like receptor 9 :Q2EEY0_HORSE
2 b L 1 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 678F 702F(A) 704T(S) 705D(N) 726H(F) (identity: 20.0 %/35.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3wpc_A_1 identity=35.9%
queryA        35:PCDEKKQNDSVIAECSNRRLQEVPQTVGKY----VTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
                :**            *    *  **          ** * *  * * *     *  * ** * **  *         *        *    **    * **:
3wpc_A_1      13:PCELQPHG---LVNCNWLFLKSVPHFSAAAPRDNVTSLSLLSNRIHHLHDSDFAQLSNLQKLNLKWN--CPPAGLSPMHFPCHMTIEPNTFLAVPTLEEL: 107
SecStr          :TSEEETTT---EEE TTS  SS     TT  GGG SEEE TT    EE TTSSTT TT  EEE TTS--B  TTTSTT      EE TTTTTT TT  EE:    
ExpBur          :ebeeeeee---ebebeeeebeebbebeeebebeebebbbbebbebeebeeebbeebeebeebebeeb--bbbeebbeeeeebebeeeeebbeebeebeeb:    

queryA       131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKT-NIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFL: 229
                : *  *     *  ** **  * *   **          *  *  **   ***    *        *    * **  ***  * *  **  ** **  * *:
3wpc_A_1     108:NLSYNGITTVPA-LPSSLVSLILSRTNILQLDPTSLTGLHALRFLYMDGNCYYKNPCGRALEVAPGALLGLGNLTHLSLKYNNLTTVPRSLPPSLEYLLL: 206
SecStr          :E  SB  SS   -  TT  EEE TTS   EE TTTSTT TT  EEE   SSBTTB  SS  EE TTTTTT TT  EEE  SS  SS  SS  TT SEEE :    
ExpBur          :bbbbbbbeebbe-bbeebbbbebbbbebbebeeebbeebeebebbebbbbbbeebeeeeebebeeebbeebeebbbbbbeebebeebbeebbeebeebbb:    

queryA       230:SNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGG-ASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIA: 328
                :*   *     **   *  *  **  *** **  *  *** *         * *    *  *  * *   **   *  **     * ****  * *   * :
3wpc_A_1     207:SYNHIVTLAPEDLANLTALRVLDVGGNCRRCDHARNPCVECPHKFPQLHSDTFS--HLSRLEGLVLKDSSLYQLNPRWFRGLGNLTVLDLSENFLYDCIT: 304
SecStr          :TTS   EE GGGGTT TT SEEE TTSS  GGG SS      TT  EE TTTTT--T TT  EEE  SS  S   GGGTTT TT  EEE TTSS TTHHH:    
ExpBur          :bbbebbebbbebbeebeebeebbbbbbbbbbeeeeeeeeebeeeeeeeeeebbe--ebeebebbbbebbbbeebeeebbeebeebbebbbbbbbbbebbe:    

queryA       329:SGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSEN: 428
                :       *  *  * ***** *     *      *  ****  *   *  *  *     ***  ** *    *  *** *     *  *  *  * ** *:
3wpc_A_1     305:KTKAFQGLAQLRRLNLSFNYHKKVSFAHLTLAPSFGSLLSLQELDMHGIFFRSLSQKTLQPLARLPMLQRLYLQMNFINQAQLGIFKDFPGLRYIDLSDN: 404
SecStr          :H  TTTT TT  EEE TT   SS  BS     GGGGG TT  EEE TTS BSEE TTTTGGGTT TT  EEE  SS   EE GGGGTT SS  EEE  SS:    
ExpBur          :ebebbeebeebeebebbbbbeeeeebeebebbebbebbebbeebbbbbbbbebbeeebbebbbebeebeebbbbebebeebebbbbeebeebebbbbbeb:    

queryA       429:RISPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSA: 528
                :***  *                                          * *      **** *      *  *  *    ** ** **  *   *  *  :
3wpc_A_1     405:RISGAVEXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXEDFMPSCKNLSFTLDLSRNNLVTVQPEMFAQLSRLQCLRLSHNSISQAVNGSQFVP: 498
SecStr          :   SS  -------------------------------------  SS  STTSS EEE  SS  SS  GGGGTT TT SEEE TTS       S TTTT:    
ExpBur          :ebebeee-------------------------------------eebbeebeebebbbbbbebebeebeeebbeebeebebbebbebebebebebebbee:    

queryA       529:IPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDD: 628
                :      ***  * **       ***  ** *******  *   ** * * *      *  * * ** *        * * **  * **** *   *   *:
3wpc_A_1     499:LTSLQVLDLSHNKLDLYHGRSFTELPRLEALDLSYNSQPFSMRGVGHNLSFVAQLPTLRYLSLAHNGIHSRVSQ-QLCSTSLWALDFSGNSLSQMWAEGD: 597
SecStr          : TT  EEE  SS      TTTTTT TT  EEE TT HHHHTSTT     GGGGG TT  EEE TTS   SSS S-  EESS  EEE  SS HHHHHTSTT:    
ExpBur          :beebbbbbbbebebebeeeebbebbeebebbbbbebeebbeeeeeebebebbeebeebebbbbbebebbeebbe-ebebebbebbbbbbbbbeebbeeee:    

queryA       629:NRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLP: 728
                :  *   * **  * ***** ***         *** **  *    * * ****  *   * ** *** ** *  *          *  *  * * *    :
3wpc_A_1     598:-LYLRFFQGLRSLIRLDLSQNRLHTLLPCTLGNLPKSLQLLRLRNNYLAFFNWSSLTLLPNLETLDLAGNQLKALSNGSLPSGTQLQRLDVSRNSIIFVV: 696
SecStr          :-TTTTTTTEETT  EEE  SS  S   HHHHTTS TT  EEE TTS  S   GGGGGGSTT  EEE TTS   EE SS S TT    EEE TTS   EE :    
ExpBur          :-ebeebbbbbeebebbbbbebebeebeeebbbbbbeebebbebeebebeebebebbeebeebebbbbbbbebebbbeeebbeebebeebebbebebeebe:    
Contact         :                                                 b                       b bb                    b  

queryA       729:SGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVK--IPRLVD-VICASPGDQRGKSIVSLEL: 819
                : **      *  * ** * * *   *         *  *    **  * *         *  * *    * *   * * ***   * **    *:
3wpc_A_1     697:PGFFALATRLRELNLSANALRTVEPSWFGFLAGS-LEVLDVSANPLHCACXAA----FVDFLLQVQAAVPGLPSRVKCGSPGQLQGRSIFAQDL: 785
SecStr          :TTTTTT TT  EEE  SS  S   GGGGTT  TT- SEEE  S  EE   - H----HHHHHHHTGGGSTTHHHH BEEESGGGTTSBTTSS  :    
ExpBur          :eebbeebeebeebebbebebeebebebbeeebee-beebbbbebebebee-ee----bbebbbebeebbebbbbebebebeeeeeeebbbeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123