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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [939 aa] | TIR domain-containing protein :Q9N5Z3_CAEEL | |
2 | b | I 1 (I) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 360S(E) 400N 402G(S) 403I(R) 424Y(D) 427E(Y) (identity: 16.7 %/26.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8suf_A_1 identity=26.5% |
queryA 285:NLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAFLTMLPRLEILDLSFNYIK-------GSYPQHINISRN-FSKLLSLRA----L: 372 : * * ** ** * * ** * * ** * * * * * * ** : 8suf_A_1 175:SLPHLQVLNISSNELPSLRREESCVAQQLLIVDLSRNRLTN---IEQFLRGIPAIRQISVAYNSIAELDLSLATPFLQQLDAEANRIVDLTSLPGTVVHV: 271 SecStr :H TT EEE S S TT TT EEE SS S --- HHHHTT EEE SS B TTT TT EEE SS SS B TT EE: ExpBur :bbeebebbebbebebeebebeeebebeebeebbbbebebee---beebbeebeebeebbbbebebeebebeebbeebeebebeebebeebeebbeebeeb: Contact : b queryA 373:HLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTR: 472 : * * * * * * * * ** * * * * * * * : 8suf_A_1 272:NLAGNALKRVPD----AVAELASLVALNVSRNEIEAGNSSVFSS-PELEMLDASYNKLDSLPVEWLQKC-----------EKRIAHLHLE-HNSIEQLTG: 354 SecStr :E TTS SS H----HHHT SS EEE SS SSS -S EEE SS SS TTTGGG -----------TTT EEE -SS T: ExpBur :bbbebebeebbe----bbbebeebebbebbebebebeeebebeb-eebeebbbbebebeebbeebbeeb-----------eeebbebbbb-ebebeebee: Contact : b bb b b queryA 473:PLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAG: 572 : * **** * * * ** ** * * *** * * * * *** * *** : 8suf_A_1 355:GVLAN--ATNLQTLDLSSNQLRVFRDEVLPENSKIGNLRLSNNS-LELLEPSSLSGL-KLESLDLSHNKLT-EVPAAIGKVEQLKKVDLSHN----RIAK: 445 SecStr :TSSTT-- SS EEE SS SEE STTS TT EEE SS - EE TTTTTT - SEEE SS S-S GGGGS S EEE TTS---- : ExpBur :ebbee--beebebbbbbbbebebbeeebbbeebebbebebbebe-beebeeebbeeb-ebeebebbebebe-ebbebbeebeebeebebbeb----ebee: queryA 573:VTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHIN: 672 :* * ** * * * * * * * * * * * * * * * : 8suf_A_1 446:VYQYV--LNKIKQLHTVDLSNNQLQSIGPYIFSDSSELHSLDVSNNEISLLFKD-------AFARCPKLRKISMKMNKIKSL--DEGLTEASGLRRLDVS: 534 SecStr : TTT--TTS SS EEE TTS B TTSSSS TT EEE SS B TT-------TT S TT EEE SS --TTTTSS TT EEE : ExpBur :beeeb--bbebeebeebebbebebeebeeebbbebeebeebbbbebebeebeee-------bbeebeebeebbbeebebeeb--eebbeebebbeebbbb: queryA 673:DNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTD-SLSDFTS----------------------SLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLK: 749 : * * * ** * * ** * * * ** * * ** * * * * * * *** : 8suf_A_1 535:HNEILVLKWSALPE--NLEILNADNNDINLLTAASMSPSTANLKSVSLSNNGITIMNADQIPNSLESLDVSNNRLAKLGKTALAAKSQLRRLNLKGNLLT: 632 SecStr :SS SB STTS S--S EEE SS B SSS STTTT EEE SS TTTS TT SEEE TTS TTTTTS TT EEE TT S: ExpBur :ebebeebebebbbe--ebeebebbebebeebeebeebebbeebeebbbbebbbeebeeebbbebbeebebbebebeebbeebbbebeebeebbbeebebe: queryA 750:TINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWM: 787 : * ** * * * **: 8suf_A_1 633:VVATESMKVVEAVHPLKVEISENPLICDCQMG----WM: 666 SecStr : GGGT TT S EEE SS EE TTGG----GG: ExpBur :ebbeebbebeebeeebebebbebebebbbebe----bb: |