[pdbjlvh2]Protein Model on 5gr9_A_1_I

Protein Model on 5gr9_A_1_I_1 (TEMPLATE: 5gr9 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (B)	polymer(polypeptide(L)) [595 aa]	Leucine-rich repeat receptor-like protein kinase TDR :TDR_ARATH
2	b		I 1 (B)	non-polymer(NAG)	2-acetamido-2-deoxy-beta-D-glucopyranose	326E 350K(N) 351G (identity: 66.7 %/32.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5gr9_A_1 identity=32.3%

queryA       120:AFLNLKNLRELLLEDNQLP-QIPSGLP--ESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETL--TNLELLSLSFNSLS: 214
                :   *** *  *    ***   ****      ** **** **      ***  *  *  * * **  *  *        *  **    *         ** :
5gr9_A_1     262:SYSNLKSLKLLDFSSNQLSGSIPSGFSTLKNLTWLSLISNNLSGEVPEGIGELPELTTLFL-WNNNFTGVLPHKLGSNGKLETMDVSNNSFTGTIPSSLC: 360
SecStr          :GGGG TT  EEE  SSEEEE   GGGGG TT  EEE  SSEEEE   GGGGS TT  EEE - SSEE S   TTTTTTS   EEE  SS   S   TTTT:    
ExpBur          :ebeebeebeebbbbebebeeebbeebeebeebbebbbbebebeeebbebbbebeebbbbbb-eebebebebbeebbeeeebebbbbbebebebebbeebb:    

queryA       215:H-------------VPPKLPSSLRKL-----FLS-NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLS: 295
                :*                 ** **        * * *          *  * ***  *** *  *         * *           *     * *****:
5gr9_A_1     361:HGNKLYKLILFSNMFEGELPKSLTRCESLWRFRSQNNRLNGTIPIGFGSLRNLTFVDLSNN--RFTDQ----IPAD-----------FATAPVLQYLNLS: 443
SecStr          :TTS   EEE  SS  EEE  GGGGG TT  EEE  SSEEESB  TTGGG TT  EEE  SS--  BS ----  GG-----------GGG SS  EEE  :    
ExpBur          :eeeebeebbbbebebeeebbebbbebeebeebebbebebeeebbebbbebeebbbbbbbeb--ebeee----bbeb-----------bbebeebebbbbb:    

queryA       296:STSL-RKINAAWFKNMPHLKVLDLEFNYLVGEIASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLP: 394
                :     **      *  * *      *  * ***          * *   *  *   *  *  *         * *   ** *    *           **:
5gr9_A_1     444:TNFFHRKLPENIWK-APNLQIFSASFSNLIGEIPNYVGCKSFYRIE---LQGNSLNGTIPWDIGHCEKL-LCLNLSQNHLNGIIPWEIS--------TLP: 530
SecStr          :S B  S   GGGGG- SS  EEE TTS  EEE    TT  S  EEE---  SSEEESB  TTGGG TT - EEE  SS  BS   GGGG--------G S:    
ExpBur          :ebebeeebbeebbe-beebeebbbbebebebebbebeebebbeebb---bbebebebebbebbbebeeb-ebbbbbebebeeebbeebb--------ebe:    
Contact         :                               b                       bb                                           

queryA       395:NLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRH: 450
                :      *  *         *           * *              * * *   :
5gr9_A_1     531:SIADVDLSHNLLTGTIPSDFGSSKTITTFNVSYNQLIGPIPSGSFAHLNPSFFSSN: 586
SecStr          :S  EEE  SS   S   GGGGG TT  EEE  SS  EEE   SGGGGS GGGG S :    
ExpBur          :ebbebebbebebeeebbeebbebeebeebbbbebebeeebbeeebeebeeebbeeb:

Protein Model on 5gr9_A_1_I_1 (TEMPLATE: 5gr9 )

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