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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [743 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | F 1 (F) | branched(oligosaccharide) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 476K 478Q 534Y 538T 558V 560D 562S 588V 590N 612E 614V (identity: 100.0 %/94.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4r08_A_1 identity=94.4% |
queryA 32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131 :********** ******************************************************** ********************: 4r08_A_1 10:RSYPCDEKKQXXXVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXNGLNITDGAFLNLKNLRELL: 109 SecStr : SSEEE --- EEE SS SS S TT SEEE TTS EE TTTTTT TT SEEE S S ----------- EE TTTTTT TT EEE: ExpBur :eeebbeeeee---eebebeebebeebbeebbeebeebebbebebeebeeebbeebeebeebbbbebbee-----------eebebeebbbeebeebeebb: queryA 132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231 :****************************************************************************************************: 4r08_A_1 110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209 SecStr : SS SS SS TT SEEE TTS EE HHHHTT TT SEEE SSS TT EE TTTTTT TT EEE SS SS S TT SEEE TT: ExpBur :bbebebeebbeebbeebbbbbbbbbebbebbeebbbebeebeebebbbbbeeeeeeeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebbb: queryA 232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331 :****************************************************************************************************: 4r08_A_1 210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309 SecStr :S EE TTTTTT TT EEE TTSS TT SS GGG EE TTTTTT TT EEE TTS S GGGGTT TT EEE TTS HHHHHH G: ExpBur :bebeebbeeebeebeebebbbbbbbbbbbeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebeeebbeebeebebbbbbebebbebbeebe: queryA 332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431 :****************************************************************************************************: 4r08_A_1 310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409 SecStr :GGGG TT EEE TT TT SS GGGGG TT EEE TT SEE GGGGGGGTT TT EEE SS EE THHHHTSSS EEE SS : ExpBur :bbeebeebbebbbbebbeeeeeeeebebbeebeebeebebbbbebbbbeebeeebbebbbebeebebbbbbebebeebebebbeebeebebbbbbebebe: queryA 432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531 :* **************************************************************************: 4r08_A_1 410:PXXXXXXXXXXXXXXXXXXXXXXXXXDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509 SecStr : ------------------------- SS TTS SSS S SS HHHHTTS EEE TTS S TTTTTT EEE TTS S TTTTSTT: ExpBur :e-------------------------eeebebeeebbeeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebee: Contact : b b queryA 532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631 :****************************************************************************************************: 4r08_A_1 510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609 SecStr : EEE TT TTTTTT TT EEE TT HHHHT TTS GGGGG SS EEE TTS SS SS EEE TTS HHHHT TT TT: ExpBur :bebbbbbebebbbeeeebbebbeebbbbbbbebbeebeeeeeebbbbbbeebeebeebebbebebebbeeeeebebebbeebbbbbbbbeebbeeebeeb: Contact : b b b b b b b b b queryA 632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731 :****************************************************************************************************: 4r08_A_1 610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709 SecStr :TTTTTT TT EEE SS S HHHHTTS TT SEEE SS S GGGGGG TT EEE TTS S GGGT S EEE SS TT : ExpBur :bebbebbeebeebbbbebebeebbeebbebbbebbeebbbbebebeebebebbeebeebebbbbeebebeebbebbeebbebbebbbbbebebeebbebb: queryA 732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818 :************************** ********************************************************: 4r08_A_1 710:LSEVSSLKHLDLSSNLLKTINKSALEXXXXXKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796 SecStr :TTS TT EEE SS S GGGT ----- EEE TT EE SGGGHHHHHHHHH TTSB GGGSBEEESGGGTTSBTTS : ExpBur :beebeebeebbbbebebebbeeebee-----ebeebbbeebebebeeebbebeebbeeeeebebeebbbbebeeeeebeeebbbebe: |