[pdbjlvh2]Protein Model on 1xcd_A_1_F

Protein Model on 1xcd_A_1_F_1 (TEMPLATE: 1xcd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [305 aa]	Decorin :PGS2_BOVIN
2	b		F 1 (A)	non-polymer(TRS)	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL	46I(V) 66T(A) 90T(H) (identity: 0.0 %/32.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1xcd_A_1 identity=32.3%

queryA        46:IAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLLEDNQLPQIPSGLP: 145
                :   **   *  **         ***  * ** *    *  * **    *              *      *  ***  *  *  * *  ***   *   *:
1xcd_A_1      35:VVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLIL--------------INNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMP: 120
SecStr          :EEE TTS  SS   S  TT  EEE  SS   EE TTTTTT TT  EEE -------------- SS   EE TTTTTT TT  EEE  SS  SB  SS  :    
ExpBur          :ebebbebebeebbeebbeebbebbbeebebeebeeebbeebeebebbbb--------------eebebeebeebbbeebeebeebbbbebebeebbbebb:    
Contact         :b                   b                       b                                                       

queryA       146:ESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNTQIKYISEEDFKGL: 245
                :  * **    * *    *     *       *  *           ** * *     *             *  ** **  * *    *        ***:
1xcd_A_1     121:KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL-----KSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGL: 215
SecStr          :TT  EEE  SS   BB GGGGTT TT  EEE  S   ----- GGGB TTTTTT TT  EEE  SS   S  SS  TT SEEE TTS   EE TTTTTT :    
ExpBur          :eebebbebeebebeebeeebbeebeebeebbbbebeb-----eeebbeebbbebbeebeebbbbebebeebbeebbeebeebbbeebebeebbeebbeeb:    

queryA       246:INLTLLDLSGNCPRCFNAPFPCVPCDGGASIN-IDRFAFQNLTQLRYLNLSSTSLRKINAA: 305
                : **  * ** *                  **   *     *   ** * *    * *    :
1xcd_A_1     216:NNLAKLGLSFN------------------SISAVDNGSLANTPHLRELHLNNNKLVKVPGG: 258
SecStr          :TT  EEE  SS------------------   EE TTTGGGSTT  EEE  SS  SS  TT:    
ExpBur          :eebbebbbbeb------------------ebeebeeebbeebeebeebebbebebeebbee:

Protein Model on 1xcd_A_1_F_1 (TEMPLATE: 1xcd )

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