[pdbjlvh2]Protein Model on 5yq5_A_1_E

Protein Model on 5yq5_A_1_E_1 (TEMPLATE: 5yq5 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [302 aa]	Osteomodulin :OMD_HUMAN
2	b		E 1 (A)	non-polymer(NAG)	2-acetamido-2-deoxy-beta-D-glucopyranose	84Q(I) 85G(N) (identity: 0.0 %/37.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5yq5_A_1 identity=37.4%

queryA        49:CSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLLEDNQLPQIPSGLPESL: 148
                :* ** *   *         * *  * *   *  **     *  *** **           * *       * *  * **  * ** * *   *  ** **:
5yq5_A_1      76:CDNRKLKTIP-NIPMHIQQLYLQFNEIEAVTANSFINATHLKEINLSHN----------KIKSQKIDY--GVFAKLPNLLQLHLEHNNLEEFPFPLPKSL: 162
SecStr          :  SS  SS  -   TT  EEE  SS    B GGGGTT TT  EEE  SS----------   GGGB T--TTTTT TT  EEE  SS   B   S  TT :    
ExpBur          :bbeeebeebb-ebeeebebbbbbebebeebebebbeebeebebbbbbeb----------ebebeebee--bbbeebeebeebbbbebbbeebbebbbebb:    
Contact         :                                   bb                                                               

queryA       149:TELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNTQIKYISEEDFKGLINL: 248
                :  * *  * *          * **  * *  *             *  *     *  * *  * *   ** *****  * * *  *  * *  *  *  *:
5yq5_A_1     163:ERLLLGYNEISKLQTNAMDGLVNLTMLDLCYNYLHDSL-----LKDKIFAKMEKLMQLNLCSNRLESMPPGLPSSLMYLSLENNSISSIPEKYFDKLPKL: 257
SecStr          : EEE  SS   B  TTTTTT TT  EEE  SS   HHH-----HTTTTTTT TT  EEE  SS   S  SS  TT  EEE  SS      TTGGGG TT :    
ExpBur          :eebbbbebebeebeeebbeebeebebbbbbebebeeeb-----beeebbeebeebeebbbbbbebeebbeebbebbeebbbeebebeebeeebbeebeeb:    

queryA       249:TLLDLSGN: 256
                :  *  * *:
5yq5_A_1     258:HTLRMSHN: 265
SecStr          : EEE  SS:    
ExpBur          :ebbebbeb:

Protein Model on 5yq5_A_1_E_1 (TEMPLATE: 5yq5 )

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