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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [733 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | D 1 (D) | branched(oligosaccharide) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 426S 472R 475I 476K 479C 487D 489S 511N 513S 534Y 536D (identity: 100.0 %/93.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8pfi_A_1 identity=93.0% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130 :********************************************************************* ******************: 8pfi_A_1 5:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNXXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 104 SecStr : SSEEEE SSSEEEE SS SS S S TT SEEE SS EE TTSS S TT EEE SS ------------- EE TTSSTT SS EE: ExpBur :ebeebbeeeeeeeeebbebeebebeebbeebbeebbebebbebebeebeeebbeebeebeebbbbebee-------------ebebeebbbeebeebeeb: queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230 :***************************************************** ********************************************: 8pfi_A_1 105:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFXXXCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 204 SecStr :E SS SS TT TT SEEE SS EE TTTTTT TT EEE TTSS --- EE TTTTTT TT EEE SS SS SS TT SEEE T: ExpBur :bbbebebeebbeebbebbbebbbbebebeebeeebbbebeebbebebbbbbbe---eeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebb: queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330 :****************************************************************************************************: 8pfi_A_1 205:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 304 SecStr :TS EE TTTTTT TT EEE TTSS SS SS TTS EE TTTTSS TT EEE SS S GGGGTT TT EEE SS HHHHHT : ExpBur :bbebeebbeeebbebeebebbbbbbbbbbeeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebebbbbeebeebebbbbbbbebbebbeeb: queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430 :****************************************************************************************************: 8pfi_A_1 305:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 404 SecStr :GGGGG TT EEE S TT SS GGGGG TT EEE TT SEE TTTTGGGTT SS EEE S EE GGGGTT SS EEE SS : ExpBur :ebbeebeebeebbbbbbeeeeeeeeebebbeebeebeebebbbbbbbbbbebeeebbebbbebeebebbbbbebebeebebbbbeebeebeebbbbebeb: Contact : b queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530 :** *********************************************************************: 8pfi_A_1 405:SPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 504 SecStr : ----------------------------- TTS SSS S SS HHHHTTSEEEE SS SS TTTTTT EEEEE SS B S TTSSST: ExpBur :ee-----------------------------eeeeeebbeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebe: Contact : b bb b b b b b queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630 :************************************** *************************************************** *: 8pfi_A_1 505:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFXXXXXTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWXXXXXR: 604 SecStr :T SEEE SS B STTTTTT TT EEE TT TTT ----- GGGGG SS EEE TT S S EESS EEE TTS HHHH ----- : ExpBur :ebebbbbbebebebbeeebbbbbeebebbbbbebeebb-----ebbbebbeebeebeebbbbebebeebeebeebebebbeebbbbbbbbeebb-----e: Contact : b b queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730 :****************************************************************************************************: 8pfi_A_1 605:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 704 SecStr : TTTTTEETT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S GGGT SS EEE SS TT: ExpBur :beebbeebeebeebbbbebebeebeeebbebbbebbeebbbbebebeebebebbeebeebebbbbeebebeebbeebeeebebbbebbbbebebeebbee: queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818 :****************************************************************************************: 8pfi_A_1 705:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 792 SecStr :SSSS TT EEE SS TTTS SS EEE TT EE SGGGHHHHHHHHH SSSB GGGSBEEESTTTBTSBTTS : ExpBur :bbbebeebbbbbbbebebeebeeebbeeeeebebeebbbbebebebeeebeebbbbbeeeeebebeebbbbebeeeeeebeebbbeee: |