Protein Model on 5ufc_A_1_D_1
(TEMPLATE: 
5ufc
)Protein Model on 5ufc_A_1_D_1
(TEMPLATE: 5ufc
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [240 aa] | Tn4-22 | |
| 2 | b | D 1 (D) | branched(oligosaccharide) | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 616S 645D(S) 647S(D) 648L(E) 692L(Y) 694D(N) 696R(N) 697G(T) 718L 720S(C) 721H(C) 742D(A) 744S(D) 745S(Q) 768E(Y) 770H(F) (identity: 12.5 %/36.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5ufc_A_1 identity=36.6% |
queryA 584:TNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTL: 683
:** *** * * * * * *** * * * * ** * * * * ** * *** :
5ufc_A_1 36:TNVQILNLYNNQITNLEPGVFDRLVNLQKLYLSGNQLQAL-------PVGVFDKLSQLTFLSLDENKLTALPNGVF----DKLTE---------------: 109
SecStr :TT SEEE SS TTTTTT TT EEE SS ------- TTTTTT TT EEE SS TTTT----TT TT---------------:
ExpBur :eebeebbbeebebeebeeeebeebeebeebbbbbbebeeb-------eeebbeebeebebbbbbebebeebbeebb----eebee---------------:
Contact : b b bb
queryA 684:LQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTC-DIGD: 782
: * * * * * * * * ** * ** * * ** * * ** * * * * *** * * ** :
5ufc_A_1 110:------LTYLNLNTNQLTALPEGVFDRLVHLKELLMCCNKLTELPRG-IERLTHLTHLALDQNQLKSIPHGAFDRLSS--LTHAYLFGNPWDCECRDIMY: 200
SecStr :------ EEE SS S TTTTTT TT EEE SS S TT-GGG TT SEEE SS TTTTTT TT-- SEEE TTS B TTBGGGHH:
ExpBur :------bebbbbbebebeebbeebbeebeebeebbbbebebeebbeb-bbebeebbebbbbebebeebeeebbeebee--beebbbbebebebebeebbb:
Contact : b b bb b bb b bb b b
queryA 783:FRRWMDEHLNV: 793
: * * * :
5ufc_A_1 201:LRNWVADHTSI: 211
SecStr :HHHHHHH GGG:
ExpBur :beebbeeeeeb:
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[assembly_id:1]
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