Protein Model on 3a7b_A_1_D_1
(TEMPLATE: 
3a7b
)Protein Model on 3a7b_A_1_D_1
(TEMPLATE: 3a7b
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [550 aa] | Toll-like receptor 2, Variable lymphocyte receptor B :TLR2_MOUSE:Q4G1L2_EPTBU | |
| 2 | b | D 1 (A) | non-polymer(LTC) | (2S)-1-({3-O-[2-(acetylamino)-4-amino-2,4,6-trideoxy-beta-D-galactopyranosyl]-alpha-D-glucopyranosyl}oxy)-3-(heptanoyloxy)propan-2-yl (7Z)-pentadec-7-enoate | 490L(F) 521L 529I 535L 537L(I) 538T(P) 539N(Q) 540N(F) 546N(L) 553L 561L(V) 565S 566H(K) 567Y(V) 568F 569R(L) 579F 595N(L) (identity: 38.9 %/29.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3a7b_A_1 identity=29.0% |
queryA 212:SLSHVPPKLPSSLRKLFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASIN-IDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNM: 310
:* * * * ** * ** * ** * * ** * ** * * * ** * ** :
3a7b_A_1 42:SFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKS------------------SRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPL: 123
SecStr : SS S TT EEE SS EE SSTTSS TT EEE TT------------------S EE TTTTTT TT EEE SS SS HHHHTT :
ExpBur :ebeebbeebeeebebbbbbebebeebbeeebeebeebeebebee------------------bebeebeeebbeebeebeebbbbebebeebeeebbeeb:
queryA 311:PHLKVLDLEFNYLVGEIASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGY-VFQELREDDFQPLMQLPNLSTINLGINFIKQI: 409
: ** * * * * * * * * * * ** * * * * :
3a7b_A_1 124:SSLKYLN-------------------------------LMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ: 192
SecStr :TT EEE------------------------------- TT SSS SS S TT TT EEEEEESSS EE TTTTTT EEEEEEEEETT EE TT:
ExpBur :eebebbb-------------------------------bbebebeebeeeebbeebeebebbbbbbeeebbebbeebbeebeebeebbbebbebeebeee:
queryA 410:DFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRHIRKRRS--TDFEFDPHSNFYHFTRPLIKPQCAAYGKAL-DLSLNS-------IFFIGPN: 499
: * * *** * * * * * * * * * * * * * * * * :
3a7b_A_1 193:SLKSIRDIHHL-TLHLSESAF------LLEIFADILSSVRYLELRDTNLARFQFSPLP-VDEVSSPMKK--LAFRGSVLTDESFNELLKLLRYILELSEV: 282
SecStr :TGGG SEEEEE-EEE SSSTT------HHHHHHHHTTTEEEEEEES B TT S- E--EEESS EE HHHHHHHHGGGGG TT EE:
ExpBur :bbeebebbebb-bbbbeebee------bbebbbbbbebbebbbbeebebeebebeebe-eeeeebebeb--bbbbebebbeebebbbbbbbebbeebeeb:
Contact : b
queryA 500:QFEN--LPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNI-: 596
: * * * * * * * * * * * ** * * * * * ** * :
3a7b_A_1 283:EFDDCTLNGLGDFNPSESDVVSELGKVETVTI---RRLHIPQFYLFYDLSTVYSLLEKVKRITVE-NSKVFLVP-----CSFSQHLKSLEFLDLSENLMV: 373
SecStr :EE S EE SS TTS S TT EEEE---ES B S HHHHHHHTT EEEEE-SS -----HHHHHH S EEE SS :
ExpBur :bbbebeeeeeeeeeeeeeebeeebeebeebbb---eeeeeeeeeeeeebeeebebbeebeebbbb-ebebeebe-----bebbeebeebebbbbbebebe:
Contact : b b b bbbb b b b bbbbb b b
queryA 597:--YTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLD: 694
: * ** ** * * * * ***** ** * * * * * * ** **:
3a7b_A_1 374:EEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGE-----ILLTLKNLTSLDISRNTFHPMPDSC--QWPEKMRFLNLSSTGIRVVKTCIPQT---LEVLD: 463
SecStr :HHHHHHHT TTSSTT EEE SS HHHHHH-----HHTT TT EEE S S -- TT EEE TTS S TTS TT--- SEEE:
ExpBur :beebeebbbeebbeebeebbbbebebebbeebbe-----bbeebeebbbbbbbebebeebeeeb--ebbeebeebbbbebebeebeebbbee---bebbb:
queryA 695:LRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDF-RRWMDEH: 790
: * * ** * * * * * * ** * * * ** ** * * ** ** * * * ** :
3a7b_A_1 464:VSNNNL----DSFSLFLPRLQELYISRNKLKTLPDASLFPV--LLVMKIASNQLKSVPDGIFDRLTS--LQKIWLHTNPWDCSCPRIDYLSRWLNKN: 552
SecStr : SS ----S TT EEE SS SS GGG TT-- EEE SS TTGGGG TT-- EEE SS B SSSSHHHHHHHHTT:
ExpBur :bbebeb----eebebebeebeebebbebebeebbebebbee--bebbbbbebebeebeeebbeebee--beebebeebebeeeeeebebbbebbeeb:
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[assembly_id:1]
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