[pdbjlvh2]Protein Model on 1p8v_A_1_D

Protein Model on 1p8v_A_1_D_1 (TEMPLATE: 1p8v )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [279 aa]	Platelet glycoprotein Ib alpha chain :GP1BA_HUMAN
2	b		D 1 (A)	non-polymer(MES)	2-(N-MORPHOLINO)-ETHANESULFONIC ACID	729S(A) 730G 732L 733S(N) 754S(G) 755A(F) 756L(F) 757E(G) (identity: 25.0 %/35.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1p8v_A_1 identity=35.4%

queryA       588:VLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQF: 687
                : * ** *  **           *  *      *  *  *           *  *  **** * *   *      *** ** *    * *       *   :
1p8v_A_1      35:ILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGT---------LPVLGTLDLSHNQLQSLPLLG-QTLPA-LTVLDVSFNRLTSLPLGALRGL: 123
SecStr          :EEE  S   SEEEGGGGTT TT  EEE TTS  SEEE  S --------- TT  EEE  SS  SS    T-TT TT-  EEE  SS      TTTTTT :    
ExpBur          :bbbbbebebeebbbeebeebeebeebbbbebebeebeeeee---------beebbebbbbebebeebbebb-ebbee-bebbebbebebeebeeebbeeb:    

queryA       688:PRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWM: 787
                :  *  * * ** *  *   *   *  *  * *  *    ** * *     *  * *  * * ** *          *    *****  * * *  **** :
1p8v_A_1     124:GELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHL---LPFAFLHGNPWLCNCEILYFRRWL: 220
SecStr          :TT  EEE TTS      TTTTTT TT  EEE  SS      TTTTTT TT  EEE  SS      TTTTTT  --- SEEE  SS B  SGGGHHHHHHH:    
ExpBur          :eebeebebbebebeebbeebbeebeebeebbbbebebeebbeebbeebeebebbbbbebebeebeeebbeeee---bebbbbbebebebeeebbbbbebb:    
Contact         :                                         bb bb                    bbbb                              

queryA       788:DEH: 790
                :   :
1p8v_A_1     221:QDN: 223
SecStr          :HHT:    
ExpBur          :eeb:

Protein Model on 1p8v_A_1_D_1 (TEMPLATE: 1p8v )

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