Protein Model on 7wrq_A_1_C_1 (TEMPLATE: 7wrq )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR8_HUMAN) A 1 (A) polymer(polypeptide(L)) [566 aa] Insulin-like growth factor-binding protein complex acid labile subunit :ALS_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [65 aa] Isoform 3 of Insulin-like growth factor I :IGF1_HUMAN 44S(E) 66T(Q) 91K(F) 128R(C) 149T(A) 171N(S) 173K(W) 174N(D) 205L(E) (identity: 0.0 %/31.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7wrq_A_1 identity=31.9%
queryA        36:CDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLLEDN: 135
                :*      *     ** * *   *  *      * *  *         ** *  *   **        * *  *           * * * **  * ** *:
7wrq_A_1      20:CSYDDDADELSVFCSSRNLTRLPDGVPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNL--------QGGQLG------SLEPQALLGLENLCHLHLERN: 105
SecStr          :E   SSSS   EE  SS   S  SS  SS S EE TTS   SB SSSS S    S EE -------- SS   ------ B TTTTTT SS    B TTS:    
ExpBur          :eeeeeeeeebbbebbeeeeeeeeeeebeebebbebeebebeebeeeebeebeebeebbb--------eeeebe------eeeeebbeebeebeebebbeb:    
Contact         :        b                     b                        b                                    b       

queryA       136:QLPQIPSGL---PESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSS---------: 223
                :**     *       *  * *  *            *  *  * * **             *  *  *  *  * *  * *    * * *          :
7wrq_A_1     106:QLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSL-------AVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDL: 198
SecStr          :      TTTTSS  S    B TT       SS S S TT    B  SS  -------    TTSS S TT   EE  SS      TTSS S TT  EEE :    
ExpBur          :ebeebeeebbeebeebebbbbbebebeebeebbbeebeebeebebbebeb-------eebeeebbeebeebeebebbebebeebbeebbeebeebeebeb:    
Contact         :                b                     b bb                              b                           

queryA       224:------------------LRKLFLSNTQIKYISEEDFKGLINLTLLDLSGN-CPRCFNAPFPCVPCDGGASINIDRFA------FQNLTQLRYLNLSSTS: 298
                :                  * ** *    *       * **  *  **** *         **               *      *  *  *  * *    :
7wrq_A_1     199:SRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNR: 298
SecStr          :TTS    B SSSSSS TT  EEE  BS    B TT S S  S       BS      SSSS S TT      TTS      TT S S TT       S  :    
ExpBur          :bebebeebeeebbeebeebebbebbebebeeeeeebbeebeebeebbbbebebeebeeebbeebeebebbebbebebeeeeeebbeebeebeebebbebe:    

queryA       299:LRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDF-----------: 387
                : *      *     * ** *  * *  *   ****  *       ** *      *        *  *  *  *** *      *   *           :
7wrq_A_1     299:IRQLAERSFEGLGQLEVLTLDHNQLQ-EVKAGAFLG-LTNVAVMNLSGNCLR-NLPEQV-----FRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFL: 390
SecStr          :   B TT S S TT  B    SS   - B TTSS S-  S  EE  TTS   -S  SST-----T S     EE  TTS    B TTSS S TT  EE  :    
ExpBur          :beebeeebbeebeebeebbbbebebe-ebeeebbee-beebeebebbebebe-ebeeeb-----beebeebebbebeebbbeebeeebbeebebbeebbb:    

queryA       388:----------QPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISPLVKDT: 437
                :          * *  *  *    *  *        ***    **   ** **   *  * :
7wrq_A_1     391:KDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADA: 450
SecStr          : SS  S B TTSSSS  S      TT       TTSSSS      EE TT       SST:    
ExpBur          :eebebeebeeebbeebeebebbbbbebebeebeeebbeebeebeebbbbebebeebbeeb:

Input Residue Numbers for Focused Sites

ex) 2,15,123