Protein Model on 5uf1_A_1_C_1
(TEMPLATE: 
5uf1
)Protein Model on 5uf1_A_1_C_1
(TEMPLATE: 5uf1
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (B) | polymer(polypeptide(L)) [241 aa] | O13 | |
| 2 | b | C 1 (C) | branched(oligosaccharide) | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 131L(W) 176Y 179W(S) 207S(L) 209S(C) 210F(C) 228F(A) 230S(D) 231N(Q) 252D(Y) 254S(F) (identity: 9.1 %/35.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5uf1_A_1 identity=35.1% |
queryA 119:GAFLNLKNLRELLLEDNQLPQIPSGLPESLTELSLI---QNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSH: 215
:* * * ** * * *** * ** *** * * ** * *** * ** * * * * * :
5uf1_A_1 52:GVFDRLVNLQTLWLNNNQLTSLPAGLFDSLTQLTILALDSNQLQALPVGVFGRLVDLQQLYLGSN-------QLSALPSAVFDRLVHLKELLMCCNKLTE: 144
SecStr :TTTTT TT EEE SS TTTTTT TT EEE SS TTTTTT TT EEE SS------- S TTTTTT TT EEE SS S:
ExpBur :eebeebeebebbbbbebebeebeeebbeebeebebbbbeebebeebeeebbeebeebeebebbeb-------ebeebbeebbeebeebebbbbbebbbee:
Contact : b b b b b b bb
queryA 216:VPPKLP--SSLRKLFLSNTQIKYISEEDFKGLINLTLLDLSGN: 256
: * * * * * * * * * ** * **:
5uf1_A_1 145:LPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN: 187
SecStr : TTGGG TT SEEE SS TTTTTT TT EEE TTS:
ExpBur :bbebbbebeebeebbbbebebeebeeebbeebeebeebbbbeb:
Contact : b bb b b
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[assembly_id:1]
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