Protein Model on 3w3g_A_1_C_1 (TEMPLATE: 3w3g )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR8_HUMAN) A 1 (A) polymer(polypeptide(L)) [752 aa] Toll-like receptor 8 :TLR8_HUMAN
2 b C 1 (C) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 226K 228F 230S 250L 252D 254S 291Y 293N 464H 465S 466N 467F 468Y (identity: 100.0 %/95.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3w3g_A_1 identity=95.4%
queryA        32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131
                :*********************************************************************           ********************:
3w3g_A_1      10:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXNGLNITDGAFLNLKNLRELL: 109
SecStr          :  SSSEEE  SS  EEE  SS  SS  S   TT  EEE  SS   EE TTTTTT TT  EEE  S S  -----------   EE TTTTTT TT  EEE:    
ExpBur          :ebebbbbeeeeeebbbebeebebeebbeebbeebbbbebbebebeebeeebbeebeebeebbbbebeee-----------eebebeebbbeebeebeebb:    

queryA       132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231
                :****************************************************************************************************:
3w3g_A_1     110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209
SecStr          :  SS  SS  SS  TT SEEE  SS   EE HHHHTT TT  EEE  SSSSS SS SS EE TTTTTT TT  EEE  SS  SS  S   TT  EEE TT:    
ExpBur          :bbebebeebbeebbebbeebbbbebebeebeeebbbebeebeebebbbbbbeeeebeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebbb:    
Contact         :                                                                                              b b b 

queryA       232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331
                :****************************************************************************************************:
3w3g_A_1     210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309
SecStr          :S   EE TTTTTT TT  EEE TTSS   SS SS     GGG   EE TTTTTT TT  EEE TTS  S   GGGGTT TT  EEE  SS  HHHHHH G:    
ExpBur          :bebeebbeebbeebeebbbbbbbbbbbbeeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebeebbbeebeebebbbbbbbbbbebbeebe:    
Contact         :                  b b b                                    b b                                      

queryA       332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431
                :****************************************************************************************************:
3w3g_A_1     310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409
SecStr          :GGGG TT  EEE  S   TT   SB    GGGGG TT  EEE TT   SEE TTTTGGGTT TT  EEE  SS   EE GGGGGS SS  EEE  SS   :    
ExpBur          :bbeebeebeebbbbbbeeeeeeeeebebbebbbebeebebbbbbbbbbbebeeebbebbbebeebbbbbbbbbebeebebebbeebeebeebbbbebebe:    

queryA       432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531
                :****                         ***********************************************************************:
3w3g_A_1     410:PLVKXXXXXXXXXXXXXXXXXXXXXXXXXFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509
SecStr          :    -------------------------  TT   SS  S SS HHHHTTS EEE TTSS  S  TTTTTT    SEEE  SS    B  S TTTTSTT:    
ExpBur          :beee-------------------------eebeeeebeeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbbbebebebebebbeebee:    
Contact         :                                bbbbb                                                               

queryA       532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631
                :****************************************************************************************************:
3w3g_A_1     510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609
SecStr          :  EEE  SS  B  STTTTTT TT  EEE TT   S   TTTSS  GGGGG SS  EEE TT        SS   BSS  EEE  SS HHHHHT TT TT:    
ExpBur          :bebbbbbebebbbbeeebbebbeebebbbbbebebeeeeeeebbbbebbeebeebeebbbbebebeebeeeeebebebbeebbbbbbbbbebbebeeeeb:    

queryA       632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731
                :****************************************************************************************************:
3w3g_A_1     610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709
SecStr          :TTTTTTBTT  EEE  SS  S   HHHHHTS TT SEEE  SS  S   GGGGGG TT  EEE  SS      S GGGT SS  EEE  SS      SS :    
ExpBur          :bbebebbeebeebbbbebebeebbeebbeebbebbbebbbbebebeebebebbeebeebebbbbeebebeebbeebeebbebbebbbbbebebeebbeeb:    

queryA       732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLEL: 819
                :****************************************************************************************:
3w3g_A_1     710:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLEL: 797
SecStr          :S S TT  EEE  SS  S   BTTB   S     EEE TT  EE SGGGHHHHHHHHH  SSB TTGGG BEEESTTTTTSBGGG   :    
ExpBur          :bbebeebeebbbbebebebbeeebbbeeeebebeebbbbebebebeeebbebeebbeebeebebbebbebebeeeeebeeebbbebee:

Input Residue Numbers for Focused Sites

ex) 2,15,123