Protein Model on 4li1_A_1_B_2
(TEMPLATE: 
4li1
)Protein Model on 4li1_A_1_B_2
(TEMPLATE: 4li1
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (B) | polymer(polypeptide(L)) [425 aa] | Leucine-rich repeat-containing G-protein coupled receptor 4 :LGR4_XENTR | |
| 2 | b | B 2 (A) | polymer(polypeptide(L)) [424 aa] | Leucine-rich repeat-containing G-protein coupled receptor 4 :LGR4_XENTR | 174N(H) 176Y(W) 205L(A) 206L 207S(T) 228F(H) 230S(H) 231N 252D 255G(Y) 293N(I) 295S(R) 346F(Y) 400N(R) 401L(N) 402G(R) 424Y(F) (identity: 17.6 %/33.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4li1_A_1 identity=33.4% |
queryA 47:AECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDG-AFLNLKNLRELLLEDNQLPQIPS---: 142
:* ** * ** **** * ** * * * * * * * * ** * * * *** ** :
4li1_A_1 21:ADCSGKGLVTVPDGLSVFTHSLDLSMNNITKLPEGAFKGFPYLEELRL---------------AGNDLSIIHPMALSGLKELKVLTLQNNQLKTVPSESL: 105
SecStr :EE TTS SS TT TT SEEE TTS TTTTTT TT EEE ---------------TTS TTTTTT SS EEE SS SB TTTT:
ExpBur :bebeeeebeebbeebbeebeebbbbebebeebeeebbeebeebeebeb---------------bebebeebeeebbebbeebebbbbbebebeebbbebb:
queryA 143:-GLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKL---PSSLRKLFLSNTQIKYIS: 238
: ** ** * * * * * * * * * * * * * * * ** * *** * * * * :
4li1_A_1 106:KGL-VSLQSLRLDANHIVTVPEDSFEGLVQLRHLWLDDNSL-------TEVPIRPLSNLPSLQALTLALNKISHIPDYAFSNLSSLVVLHLHNNKIRTLG: 197
SecStr :TT -TT EEE SS B TTTTTT TT EEE SS -------SS HHHHTT TT EEE SS EE TTTTTT TT EEE SS EE :
ExpBur :eeb-eebebbebbbbebeebeeebbeebeebeebebbebeb-------eebbeebbeebeebeebbbbebebeebeeebbeebeebeebebeebebeebb:
Contact : b b bbb b bb
queryA 239:EEDFKGLINLTLLDLSGNCPRCFNAPFPCVP---------------CDGGASIN---------------IDRFAFQNLTQLRYLNLSSTSLRKINAAWFK: 308
: * ** ** *** * * * ** * ***** * * * * ** :
4li1_A_1 198:PHCFHGLDNLEALDLNYNNLIDFPDSIRSLPNLKELGFHSNSITIIPDGAFVKNPLLRTIHLYDNPLSFVGNSAFQNLSDLHFLIIRGAS----NVQWFP: 293
SecStr :TTTTTT TT EEE SS S GGGGG TT EEE SS EE TTTTTT TT EEE SS EE TTTT S TT EEEEE T----T S :
ExpBur :eebbebbeebebbbbbebebeebbebbebbeebeebbbbbbebeebeeebbeebeebebbebeebebeebbeebbeebeebeebebeebe----ebeebb:
Contact : b b b bb b b
queryA 309:NMPHLKVLDLEFNYLVGEIASG---AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINF: 405
:* ** * * * * **** * * * ** * ** ** * * * * :
4li1_A_1 294:NLTGTN--NLESLTLTGTKIRSIPIKFCQEQKMLRTLDLSYNEISALV--------GFEGCSSLEEVYLQNNQIQEVQNETFQGLAALRMLDLSRNRIHT: 383
SecStr : TT -- SEEEEESS THHHHH SS EEE SS S -------- TT TT EEE SS EE SSSSTT TT EEE SS E:
ExpBur :ebeebe--ebebbbbbebebeebeeebbeebeebebbbbbebebeebe--------ebeebeebeebebbebebeebeeebbeebeebeebbbbebebee:
Contact : b bbb
queryA 406:IKQIDFKLFQNFSNLEIIY: 424
:* * ** :
4li1_A_1 384:IHKEAFVTLKALTNLDLSF: 402
SecStr :E TTSSTT TT EEE S:
ExpBur :beeebbeebeebeebbbbe:
Contact : b
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[assembly_id:2]
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