Protein Model on 5zln_A_1_B_1
(TEMPLATE: 
5zln
)Protein Model on 5zln_A_1_B_1
(TEMPLATE: 5zln
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [751 aa] | Toll-like receptor 9 :TLR9_MOUSE | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [753 aa] | Toll-like receptor 9 :TLR9_MOUSE | 107P 108G(L) 109I(H) 183F(Y) 184N(K) 262N(H) 264P 265F(N) 266P 346F 378V(F) 403I(M) 427E(D) 490L(R) 492S(N) 494F(V) 514A(H) 515N 516S 518A 541R(K) 545D(Y) 566H(Q) 570I(M) 571A(K) 572G 573V(I) 598T 599L(R) 626D 627D(E) 628D(G) 630R(L) 653H(I) 655P(R) 657E(Q) 678F 725S(V) 804A(G) (identity: 28.2 %/34.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5zln_A_1 identity=34.4% |
queryA 35:PCDEKKQNDSVIAECSNRRLQEVPQTVGKY----VTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
:** * * * ** * * * * * * * * * ** ** * * * * ** * **:
5zln_A_1 9:PCELKPHG---LVDCNWLFLKSVPRFSAAASCSNITRLSLISNRIHHLHNSDFVHLSNLRQLNLKWN--CPPTGLSPLHFSCHMTIEPRTFLAMRTLEEL: 103
SecStr :TSEE SSS---EEE TTS SS TT S TT EEE TT EE TTTTGGGTT SEEE TTS--B GGGSTT EE TTTTTT TT EE:
ExpBur :ebeeeeee---ebebeeeebeebbebeebeebeebeebbbbbbebeebeeebbeebeebeebebeeb--bbbeebbeeeeebebeeeeebbbebeebeeb:
Contact : bbb
queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCE-KTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFL: 229
: * * * ** ** *** ** * * * *** * * * ** *** * * ** ** ** * :
5zln_A_1 104:NLSYNGITTVPR-LPSSLVNLSLSHTNILVLDANSLAGLYSLRVLFMDGNCYYKNPCTGAVKVTPGALLGLSNLTHLSLKYNNLTKVPRQLPPSLEYLLV: 202
SecStr :E SB SS - TT EEE TTSS EE TTTTTT TT EEE SSBTTB SS EE TTTTTT TT EEE SS SS SS TT SEEE :
ExpBur :ebbebbbeebbe-bbeebeebbbbbbebeebeeebbeebeebebbebbbbbbeebeeeeebebeebbbeebeebbebbbeebbbeebbeebbeebeebbb:
Contact : bb
queryA 230:SNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIAS: 329
:* * ** * * ** *** ** ** ** * * * * * * * * ** * ** **** * * * :
5zln_A_1 203:SYNLIVKLGPEDLANLTSLRVLDVGGNCRRCDHAPNPCIEC-GQKSLHLHPETFHHLSHLEGLVLKDSSLHTLNSSWFQGLVNMSVLDLSENFLYESIQH: 301
SecStr : SS EE GGGGTT TT SEEE TTSS GGG SS -SSSS EE TTTTTT TT EEE SS GGGGTT TT EEE TTSS TTHHHH:
ExpBur :bbbebeebbeebbeebeebeebbbbbbbbbeeeeeeeeeeb-eeeebebeeebbeebeebebbbbebbbbeebeebbbeebeebbebbbbbbbbbebbee:
Contact : b bbb
queryA 330:GAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENR: 429
: * ** * ***** * * * ** * * * * * ** * * * *** * * * * ** **:
5zln_A_1 302:TNAFQNLTRLRKLNLSFNYRKKVSFARLHLASSFKNLVSLQELNMNGIFFRSLNKYTLRWLADLPKLHTLHLQMNFINQAQLSIFGTFRALRFVDLSDNR: 401
SecStr : TTTT TT EEE TT TT BS GGGGG TT EEE TTS BSEE TTTSGGGTT TT EEE SS EE GGGGGS SS EEE SS :
ExpBur :bebbeebeebeebebbbbbeeeeebeebebbebbeebeebeebbbbbbbbeebeeebbeebbebeebbbbbbbebebeebebbbbeebeebeebbbbebe:
Contact : b b b b
queryA 430:ISPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAI: 529
:** * * *** * * * * * ** ** ** ** * * :
5zln_A_1 402:ISGPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNFMD-----RCKNFKFTMDLSRNNLVTIKPEMFVQLSRLQCLSLSHNSIAQAVQGSQFLPL: 496
SecStr : SS -------------------------------- GGG-----GGTT S EEE SS SS GGGGTT TT SEEE TTS S SSTT :
ExpBur :bebeee--------------------------------eebbe-----ebeeeebbbbbbebebeebeeebbeebeebbbbbbbebebebebebebbeeb:
Contact : b b b bbb b
queryA 530:PHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDN: 629
: *** * ** ** * ******* * * * * * * * ** * * * * * * **** * * :
5zln_A_1 497:TNLQVLDLSHNKLDLYHWKSFSELPQLQALDLSYNSQPFSMKGIGHNFSFVAHLSMLHSLSLAHNDIHTRVSSH-LNSNSVRFLDFSGNGMGRMW-DEGG: 594
SecStr :TT EEE SS TTTTTT TT EEE TT GGGG TT GGGGG TT EEE TTS SSS S - EESS EEE SS HHHHT-TSTT:
ExpBur :eebebbbbbebebebeeeebbebbeebebbbbbebeebbeeeeeebebebbeebeebebbbbbbbebbbebbee-bebebbeebbbbebbbeebb-eeee:
Contact : b b b bbbb bb bbb
queryA 630:RYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPS: 729
: * * ** * **** * * *** ** * ** * ** ** * * ** *** ** * ** * * * * * :
5zln_A_1 595:LYLHFFQGLSGLLKLDLSQNNLHILRPQNLDNLPKSLKLLSLRDNYLSFFQWTSLSFLPNLEVLDLAGNQLKALTNGTLPNGTLLQKLDVSSNSIVSVVP: 694
SecStr :TTTTTTTEETT EEE SS S HHHHHTS TT EEE TTS GGGGGG TT EEE TTS SB SS S TT EEE SS B T:
ExpBur :ebbebbeebeebeebbbbebebeebeeebbebbbeebeebbbeebebeebebebbeebeebeebbbbebebebbeeeebbeebebeebbbbebebeebee:
Contact :b b b b b b
queryA 730:GFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVD-VICASPGDQRGKSIVSLELTTC: 822
: * ** ** * *** * * * ** * * * * * * * *** * ** * *:
5zln_A_1 695:AFFALAVELKEVNLSHNILKTVDRSWF-GPIVMNLTVLDVRSNPLHCACGAAFVDLLLE--VQTKVPGLANGVKCGSPGQLQGRSIFAQDLRLC: 785
SecStr :TTTTT TT EEE SS S GGGT-GGGGGG SEEE S EE TT THHHHHHH--TGGGSTTHHHHSBEEESGGGBTSBTTSS SS :
ExpBur :ebbeebeebeebebbebebeebeeebb-eebbeebeebbbeebebebeeebebbebbbe--beeebebbbeebebeeeeebeeebbbeeebeee:
Contact : b
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[assembly_id:1]
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