Protein Model on 5wyx_A_1_B_1
(TEMPLATE: 
5wyx
)Protein Model on 5wyx_A_1_B_1
(TEMPLATE: 5wyx
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [750 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [739 aa] | Toll-like receptor 8 :TLR8_HUMAN | 261F 262N 264P 266P 351G 352S 353Y 378V 403I 405F 407K 427E 429R 431S 432P 434V 492S 494F 495F 518A 520V 543D 566H 567Y 568F 570I 571A 572G 573V 574T (identity: 100.0 %/95.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5wyx_A_1 identity=95.3% |
queryA 32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131
:********************************************************************* ********************:
5wyx_A_1 10:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXNGLNITDGAFLNLKNLRELL: 109
SecStr : SSSEEEEETTEEEEE SS SS S TTEEEEE SS EE TTSSTT TT EEE TT S ----------- EE TTTTTT TT EEE:
ExpBur :eeebbbeeeeeeeebbebeebebeebbeebeeebbebebbebebeebeeebbeebeebeebbbbebeee-----------ebbebeebbbeebeebeebb:
queryA 132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231
:****************************************************************************************************:
5wyx_A_1 110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209
SecStr : SS SS SS TT SEEE SS EE TTTTTT TT SEEE SSS SSS S EE TTTTTT TT EEE SS SS S TT EEE TT:
ExpBur :bbebebeebbbbbbebbebbbbbebebeebeeebbbebeebeebbbbbbbeeeeebeebebeebbbeebeebebbbbbbbbbeebbeebbebbeebebbe:
queryA 232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331
:****************************************************************************************************:
5wyx_A_1 210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309
SecStr :S EE TTTTTT TT EEE TTSS TT SS STT EE TTTTTT TT EEE TTS S GGGGTT TT EEE SS HHHHHS G:
ExpBur :bebeebbeeebeebeebbbbbbbbbbbbbeeeeeeeeebeeeeebebeeebbeebeebeebbbbbbbbeebeebbbeebeebebbbbbebebbebbeebe:
Contact : bb b b
queryA 332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431
:****************************************************************************************************:
5wyx_A_1 310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409
SecStr :GGGG TT EEE TT TT SB GGGGG TT EEE TT SEE GGGGGGGTT TT EEE TT EE GGGGGG TT EEE TT :
ExpBur :bbeebeebeebbbbbbeeeeeeeeebebbeebeebeebebbbbbbbbbbebeeebbebbbebeebbbbbbbbbebeebebebbeebeebebbbbbebebe:
Contact : bbb b b b b b b b
queryA 432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531
:*** ***********************************************************************:
5wyx_A_1 410:PLVXXXXXXXXXXXXXXXXXXXXXXXXXXFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509
SecStr : -------------------------- TTS SSS S SS HHHHTTS EEE TTSS SS TTTTTT SEEE SS B S TTTTSTT:
ExpBur :bee--------------------------eeeeeeebbeeeeebeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebee:
Contact :b b b bb b b
queryA 532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631
:****************************************************************************************************:
5wyx_A_1 510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609
SecStr : EEE S B STTTTTT TT EEE TT TT S B GGGGG SS EEE TT BSS EESS EEE SS HHHHHT TT TT:
ExpBur :bebbbbbebebebeeeebbebbeebebbbbbebeeeeeeeeeebbbebbeebeebeebebbebebeebeeeeebebebbeebbbbbbebbebbebeeeeb:
Contact : b bbb bbbbb
queryA 632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731
:****************************************************************************************************:
5wyx_A_1 610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709
SecStr :TTTTTEETT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S GGGT SS EEE SS TTS:
ExpBur :bebbeebeebeebbbbebebeebbeebbeebbebbbebbbbebebeebebebbeebeebebbbbeebebeebbebbbebbebbeebbbbebebeebbebb:
queryA 732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818
:***************************************************************************************:
5wyx_A_1 710:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796
SecStr :S S EEE SS S TTTS SS EEE TT EE SSTTHHHHHHHHT TTSB GGG BEEETTTSTTSBGGG :
ExpBur :bbeeeebebbbbbebebeebeeebeeeeeebebeebbbbebebebeeebeebbebbeebeebebbebbbbebeeeeebeeebbbebe:
|
[assembly_id:1]
[help]