Protein Model on 5uff_A_1_B_1
(TEMPLATE: 
5uff
)Protein Model on 5uff_A_1_B_1
(TEMPLATE: 5uff
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [216 aa] | RBC36 | |
| 2 | b | B 1 (B) | branched(oligosaccharide) | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | 647S(H) 694D 697G(T) 718L(F) 720S(C) 721H(C) 742D(A) 744S(D) 745S(Q) 768E(Y) 770H(F) (identity: 9.1 %/30.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5uff_A_1 identity=30.2% |
queryA 630:RYISIFKGLK-NLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLP: 728
:* * * * * * * * * * ** * * * *** * * * * * * * **:
5uff_A_1 18:RHASVPAGIPTNAQILYLHDNQITKLEPGVFDSL-INLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELP: 116
SecStr : SS S TT SEEE SS TTTTTT -TT EEE SS TTTTTT TT EEE SS TTTTTT TT EEE SS SS :
ExpBur :ebeebbeebeeebebbbbeebebeebeeeebeeb-eebeebbbbebebeebeeebbeebeebebbebbebebeebeeebbeebeebeebbbbebebeebb:
Contact : b b b b bb
queryA 729:SGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTC-DIGDFRRWMDEHLNVKI: 795
: * * ** * * ** * * * * *** * * ** * * * :
5uff_A_1 117:RG-IERLTHLTHLALDQNQLKSIPHGAFDRLSS--LTHAYLFGNPWDCECRDIMYLRNWVADHTSIAM: 181
SecStr :TT-GGG TT SEEE SS TTTTTT TT-- SEEE SS B TTBGGGHHHHHHHHHTTTTEE:
ExpBur :eb-beebeebebbbbbebebeebeeebbeebee--beebbbbebebebebbebbbbeebbeeeeebbb:
Contact : b bb b b
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[assembly_id:1]
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