Protein Model on 5awc_A_1_B_1
(TEMPLATE: 
5awc
)Protein Model on 5awc_A_1_B_1
(TEMPLATE: 5awc
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [749 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [742 aa] | Toll-like receptor 8 :TLR8_HUMAN | 182Y 183F 184N 185K 261F 262N 263A 264P 265F 266P 346F 403I 405F 427E 429R 431S 460E 490L 491N 492S 494F 514A 516S 518A 541R 543D 566H 567Y 570I 571A 572G 573V 574T 600T 601D 622I 627D 628D 629N 630R 677K (identity: 100.0 %/95.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5awc_A_1 identity=95.1% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
:*********** ******************************************************** ******************:
5awc_A_1 9:SRSYPCDEKKQXXXVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108
SecStr : SSSEEE --- EEE SS SS S TT EEE TTS EE TTTTTT TT EEE S S ------------ EE TTTTTT TT EE:
ExpBur :ebeebbbeeee---ebbebbebebeebbeebeeebeebebbebebeebeeebbeebeebbebbbbbbbee------------ebebeeebbeebeebeeb:
queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230
:****************************************************************************************************:
5awc_A_1 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208
SecStr :E TTS SS SS TT SEEE SS EE HHHHTT TT SEEE SSS TT EE TTTTTT TT EEE SS SS S TT SEEE T:
ExpBur :bbbbbebeebbeebbeebeebbbbbbebbebeeebbbebeebebbebbbbbbeeeeeeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebb:
Contact : bbbb
queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330
:****************************************************************************************************:
5awc_A_1 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308
SecStr :TS EE SSTTTT TT EEE TTSS TT SS SGGG EE TTTTTT TT EEE TTS S GGGGTT TT EEE TTS HHHHHS :
ExpBur :bbebeebbeeebeebeebebbbbbbbbbbbeeeebebeebeebeebebeeebbeebeebeebbbbbbbbeebeeebbeebeebebbbbbebebbebbeeb:
Contact : bbbbbb
queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430
:****************************************************************************************************:
5awc_A_1 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408
SecStr :GGGGG TT EEE S TT SB GGGGG TT EEE TT SEE GGGGGGGTT TT EEE TTS EE GGGGGGSS SEEE SS :
ExpBur :ebbeebeebbebbbbbbbeeeeeeeebebbeebeebebbebbbbbbbbbeebeeebbebbbebeebebbbbbebebeebebebbeebeebebbbbbebeb:
Contact : b b b b b
queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530
:*** *************************************************************************:
5awc_A_1 409:SPLXXXXXXXXXXXXXXXXXXXXXXXXDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508
SecStr : ------------------------ SS TTS SSS S SS HHHHTTS EEE TTS S TTTTTT SEEE TTS S TTTTST:
ExpBur :ebe------------------------eeebebeeebbeeeeeebeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebe:
Contact :b b bbb b b b b
queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630
:****************************************************************************************************:
5awc_A_1 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608
SecStr :T SEEE S TTTTTT TT EEE S HHHHT TTS GGGGG SS EEE TTS SS BSS EEE TTS HHHHT TT T:
ExpBur :ebebbbbbebebebeeeebbebbeebbbbbbbebeeebeeeeeebbbbbbeebeebeebbbbebebebbeeeeebebebbeebbbbbbbbeebbeeebee:
Contact : b b bb bbbbb bb b bbbb
queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730
:****************************************************************************************************:
5awc_A_1 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708
SecStr :TTTTTTTBTT EEE TTS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS TTGGGT S EEE SS TT:
ExpBur :bbebbebbeebeebbbbebebeebeeebbebbbebbeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbebbebbbbbebebeebbeb:
Contact : b
queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818
:****************************************************************************************:
5awc_A_1 709:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796
SecStr :HHHH SS EEE SS HHHH SS EEE TT EE SGGGHHHHHHHHTTTTSB GGGSBEEESGGGTTSBTTS :
ExpBur :bbbbbeebeebbbbebebebbeeebbeeeeebebeebbbbebebebeeebbebbebbeeeeebebbebbbbebeeeeebeeebbbeee:
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[assembly_id:1]
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