Protein Model on 4qbz_A_1_B_1
(TEMPLATE: 
4qbz
)Protein Model on 4qbz_A_1_B_1
(TEMPLATE: 4qbz
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [754 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [751 aa] | Toll-like receptor 8 :TLR8_HUMAN | 100V 182Y 183F 184N 185K 261F 262N 263A 264P 265F 266P 346F 403I 405F 427E 460E 490L 491N 492S 494F 514A 516S 541R 543D 566H 567Y 569R 570I 571A 572G 573V 574T 598T 600T 622I 625N 627D 628D 629N 630R 701L 747L 749K 775E 805S 807G 810R (identity: 100.0 %/95.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4qbz_A_1 identity=95.7% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
:********************************************************************** ******************:
4qbz_A_1 9:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108
SecStr : SSEEE SS EEE SS SS S TT EEE SS EE TTTTTT TT EEE S S ------------ EE TTTTTT TT EE:
ExpBur :ebeebbebeeeeebbbbebeebebeebbeebbeebbebebbbbebeebeeebbeebeebeebbbbbbeee------------ebebeebbbeebeebeeb:
Contact : b
queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230
:****************************************************************************************************:
4qbz_A_1 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208
SecStr :E SS SS SS TT EEE SS EE HHHHTT TT SEEE SSS TT S EE TTTTTT TT EEE SS SS S TT SEEE T:
ExpBur :bbbebebeebbeebbebbebbbbbbbebbebbeebbbebeebebbebbbbbeeeeebeebebeebbbeebeebebbbbbbbbbeebbeebbebbeebebb:
Contact : bbbb
queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330
:****************************************************************************************************:
4qbz_A_1 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308
SecStr :TS EE TTTTTT TT EEE TTSS TT SS GGG EE TTTTTT TT EEE TTS S GGGGTT TT EEE TTS THHHHHS :
ExpBur :bbebeebbeeebeebeebebbbbbbbbbbbeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebeebbbeebeebebbbbbebebbebbeeb:
Contact : bbbbbb
queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430
:****************************************************************************************************:
4qbz_A_1 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408
SecStr :GGGGG TT EEE TT TT SS GGGGG TT EEE TT SEE GGGGGGGTT TT EEE SS EE GGGGGGSS SEEE SS :
ExpBur :ebbeebeebeebbbbebbeeeeeeeebebbeebeebeebebbbbebbbbeebeeebbebbbebeebebbbbbebebeebebebbeebeebeebbbbebeb:
Contact : b b b b
queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530
:**** **************************************************************************:
4qbz_A_1 409:SPLVXXXXXXXXXXXXXXXXXXXXXXTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508
SecStr : ---------------------- SS TTS SSS S SS HHHHTTS EEE SS S TTTTTT SEEE SS S TTTTST:
ExpBur :eeee----------------------eeeeeebeeebbeeeeeebeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebe:
Contact : b bbb b b b
queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630
:****************************************************************************************************:
4qbz_A_1 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608
SecStr :T EEE SS TTTTTT TT EEE S HHHHT TTS GGGGG SS EEE TTS SS BSS EEE TTS HHHHT TT T:
ExpBur :ebebbbbbebebbbeeeebbebbeebbbbbbbebeeebeeeeeebbbbbbeebeebeebbbbebebebbbeeeebebebbeebbbbbbbbeebbeeeeee:
Contact : b b bb bbbbbb b b b b bbbb
queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730
:****************************************************************************************************:
4qbz_A_1 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708
SecStr :TTTTTTTBTT EEE SS S HHHHHTS TT SEEE SS GGGGGG TT EEE SS S GGGT S EEE SS TT:
ExpBur :bbebbeebeebeebbbbebebeebeeebbebbbeebeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbebbebbbbbebebeebbee:
Contact : b
queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818
:****************************************************************************************:
4qbz_A_1 709:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796
SecStr :TTTT TT EEE TTS S HHHH SS EEE TT EE SGGGHHHHHHHHH TTSB GGGSBEEESTTTTTSBGGG :
ExpBur :bbeebebbeebbbbebebeebeeebbebeeebebeebbbbebebebeeebeebbebbeeeeebebeebbebebeeeeebeeebbbebe:
Contact : b b b b b b
|
[assembly_id:1]
[help]