[pdbjlvh2]Protein Model on 4p8s_A_1_B

Protein Model on 4p8s_A_1_B_1 (TEMPLATE: 4p8s )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [282 aa]	Reticulon-4 receptor-like 2 :R4RL2_RAT
2	b		B 1 (B)	branched(oligosaccharide)	2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	721H(G) 745S(N) (identity: 0.0 %/31.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4p8s_A_1 identity=31.5%

queryA       585:NLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNR-LDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTL: 683
                :**  * *  **  *           * **    ** *  *  *        * **  *  * *    *   *   *  *  **  *    * *      *:
4p8s_A_1      55:NLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPD-------TFQGLERLQSLHLYRCQLSSLPGNIFRGL-VSLQYLYLQENSLLHLQDDL: 146
SecStr          :T SEEE  SS   EE TTTTTT TT  EEE    TT     TT-------TTTT TT  EEE TTS      TTTTTT -TT  EEE TTS      TTT:    
ExpBur          :ebebbebbebebeebeeebbeebeebeebbbbebeebeebeee-------bbeebeebebbbbbebebeebeeebbeeb-eebeebbbbebebeebeeeb:    

queryA       684:LQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDF: 783
                :      *  * * ** *  **        **  ***  **            * *  * *  * *      **       *  * *  **  * *     :
4p8s_A_1     147:FADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEAL--ADLPALEFLRLNANPWACDCRARPL: 244
SecStr          :TTT TT  EEE TTS   EE TTTTTT TT  EEE TTS   EE TTTTTT TT  EEE  SS  S   HHHH--HT TT  EEE  SS EE SGGGHHH:    
ExpBur          :beebeebebbbbbebebeebeeebbeebebbeebbbbebebeebeebbbeebeebbbbebbebebeebeeebb--ebbeebeebebbebebbbeeebeeb:    
Contact         :                                     b                       b                                      

queryA       784:RRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLELT: 820
                :  *             ** ** *    *     *  *:
4p8s_A_1     245:WAWFQR---ARVSS-SDVTCATPPERQGRDLRTLRDT: 277
SecStr          :HHHHHH---   EE-   BEEESGGGTTSBGGG  GG:    
ExpBur          :bebbee---eeeee-bebebeeeeebeeebbeebeee:

Protein Model on 4p8s_A_1_B_1 (TEMPLATE: 4p8s )

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