Protein Model on 3w3k_A_1_B_1
(TEMPLATE: 
3w3k
)Protein Model on 3w3k_A_1_B_1
(TEMPLATE: 3w3k
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [746 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [747 aa] | Toll-like receptor 8 :TLR8_HUMAN | 182Y 183F 184N 185K 261F 262N 263A 264P 265F 266P 346F 403I 405F 427E 429R 460E 490L 491N 492S 494F 514A 515N 516S 518A 541R 543D 566H 567Y 570I 571A 572G 573V 574T 600T 622I 625N 627D 628D 629N 630R (identity: 100.0 %/94.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3w3k_A_1 identity=94.8% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
:********* ******************************************************** ******************:
3w3k_A_1 9:SRSYPCDEKXXXXXVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108
SecStr : SSEE ----- EEE TTS SS S TT EEE TTS EE TTTSTT SS EEE S S ------------ EE TTTTTT SS EE:
ExpBur :ebeebbbee-----eebebeebebeebbeebeeebeebebbebebeebeeebbeebeebeebbbbebeee------------ebebeebbbeebeebeeb:
queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230
:****************************************************************************************************:
3w3k_A_1 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208
SecStr :E SS SS SS TT SEEE SS EE HHHHTT TT EEE SSS TT EE TTTTTT TT EEE SS SS SS TT EEE T:
ExpBur :bbbebebeebbeebbebbbbbbbbbbebeebeeebbbebeebebbebbbbbeeeeeeeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebb:
Contact : bbbb
queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330
:****************************************************************************************************:
3w3k_A_1 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308
SecStr :TS EE TTTSTT SS EEE TTSS TT SS GGG EE TTTTTT TT EEE TTS SS GGGGTT TT EEE SSSTHHHHHS :
ExpBur :bbebeebeeeebeebeebbbbbbbbbbbbeeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebeebbbeebeebebbbbbebebbebbeeb:
Contact : bbbbbb
queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430
:****************************************************************************************************:
3w3k_A_1 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408
SecStr :GGGGG TT EEE TT TT SS GGGGG TT EEE TT SEE GGGGGGGTT TT EEE SS EE GGGGGGSS SEEE SS :
ExpBur :ebbebbeebeebbbbbbbeeeeeeeebebbeebeebeebebbbbbbbbbeebebebbebbbebeebbbbbbbebebeebebebbeebeebeebbbbebeb:
Contact : b b b b b
queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530
:**** ************************************************************************:
3w3k_A_1 409:SPLVXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508
SecStr : ------------------------ S TTS SSS S SS HHHHTTS EEE SS S TTTTTT SEEE SS S TTTTST:
ExpBur :eeee------------------------eeeebeeeebeeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebe:
Contact : b bbb b bbb b
queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630
:****************************************************************************************************:
3w3k_A_1 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608
SecStr :T EEE SS TTTTTT TT EEE TT HHHHT TTS GGGGG SS EEE TT SS BSS EEE SS HHHHT TT T:
ExpBur :ebebbbbbebebbbeeeebbebbeebbbbbbbebeeebeeeeeebbbbbbeebeebeebbbbebbbebbeeeeebebebbeebbbbbbebeebbeeebee:
Contact : b b bb bbbbb b b b bbbb
queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730
:****************************************************************************************************:
3w3k_A_1 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708
SecStr :TTTTTTTBTT EEE SS S HHHHHTS TT SEEE SS GGGGGG TT EEE SS S GGGT S EEE SS TT:
ExpBur :beebbeebeebeebbbbebebeebbeebbebbbeebeebbbbebebeebebebbeebeebebbbbebbebeebbeebeebbebbeebbbbebebeebbeb:
queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 817
:***************************************************************************************:
3w3k_A_1 709:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 795
SecStr : TTT TT EEE SS GGGG SS SEEE TT EE SGGGHHHHHHHHH SSSB GGGSBEEESTTTTTSBGGG :
ExpBur :bbbebebbeebbbbebebeebeeebbeeeeebebeebbbbebebebeeebeebeebbeeeeebebbebbbbebbeeeeeeeebbeee:
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[assembly_id:1]
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