Protein Model on 5awd_A_2_A_1
(TEMPLATE: 
5awd
)Protein Model on 5awd_A_2_A_1
(TEMPLATE: 5awd
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 2 (A) | polymer(polypeptide(L)) [750 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [750 aa] | Toll-like receptor 8 :TLR8_HUMAN | 182Y 183F 184N 261F 262N 263A 264P 265F 266P 346F 403I 405F 427E 459F 460E 490L 491N 492S 494F 514A 516S 541R 543D 566H 567Y 570I 571A 572G 573V 574T 598T 600T 601D 622I 625N 627D 628D 629N 630R 773P 775E 804A 805S 807G 810R (identity: 100.0 %/95.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5awd_A_2 identity=95.2% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
:*********** ******************************************************** *******************:
5awd_A_2 9:SRSYPCDEKKQXXSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNXXXXXXXXXXXXNGLNITDGAFLNLKNLREL: 108
SecStr : SSEEE -- EEE SS SS S TT EEE SS EE TTSSTT TT EEE S ------------ EE TTTTTT TT EE:
ExpBur :ebeebbbbeee--ebbbebeebebeebbeebbeebbebebbebebeebeeebbeebeebbbbbbbebee------------eebebeebbbeebeebeeb:
queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230
:****************************************************************************************************:
5awd_A_2 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208
SecStr :E SS SS SS TT SEEE SS EE HHHHTT TT SEEE SSS TT EE TTTTTT TT EEE SS SS S TT SEEE T:
ExpBur :bbbebebeebbeebbeebebbbbbbbebbebbeebbbebeebeebebbbbbbeeeeeeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebb:
Contact : bbb
queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330
:****************************************************************************************************:
5awd_A_2 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308
SecStr :TS EE TTTTTT TT EEE TTSS TT SS SGGG EE TTTTTT TT EEE TTS S GGGGTT TT EEE TTS THHHHHH :
ExpBur :bbebeebbeeebeebeebebbbbbbbbbbbeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebbebbbeebeebebbbbbebebbebbeeb:
Contact : bbbbbb
queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430
:****************************************************************************************************:
5awd_A_2 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408
SecStr :GGGGG TT EEE TT TT SS GGGGG TT EEE TT SEE GGGGGGGTT TT EEE SS EE GGGGGGSS SEEE SS :
ExpBur :ebbeebeebeebbbbebbeeeeeeeebebbeebeebeebebbbbbbbbbbebeeebbebbbebeebebbbbbebebeebebebbeebeebebbbbbebeb:
Contact : b b b b
queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530
:**** ************************************************************************:
5awd_A_2 409:SPLVXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508
SecStr : ------------------------ S TTS SSS S SS HHHHTTSEEEE SS S TTTTTT EEEEE SS S TTTTST:
ExpBur :eeee------------------------eebebeeebbeeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebe:
Contact : bb bbb b b b
queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630
:****************************************************************************************************:
5awd_A_2 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608
SecStr :T EEE SS TTTTTT TT EEE S HHHHT TTS GGGGG SS EEE TT SS BSS EEE TTS HHHHT TT T:
ExpBur :ebebbbbbebebbbeeeebbebbeebbbbbbbebbeebeeeeeebbbbbbeebeebeebbbbebebeebbeeeebebebbeebbbbbbbbeebbeeebee:
Contact : b b bb bbbbb b bb b b bbbb
queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730
:****************************************************************************************************:
5awd_A_2 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708
SecStr :TTTTTTTBTT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S GGGT SS EEE SS TT:
ExpBur :bbebbeebeebeebbbbebebeebbeebbebbbeebeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbebbebbbbbebebeebbeb:
queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818
:****************************************************************************************:
5awd_A_2 709:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796
SecStr : SSS TT EEE SS S GGGG S EEE TT EE SGGGHHHHHHHHH TTSB GGGSBEEESTTTTTSBTTS :
ExpBur :bbbbbebbeebbbbebebeebeebbbeeeeebebeebbbbebebebeeebbebeebbeeeeebebbebbbbebbeeeebeeebbeeee:
Contact : b b bb b b
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