Protein Model on 3w3m_A_2_A_1
(TEMPLATE: 
3w3m
)Protein Model on 3w3m_A_2_A_1
(TEMPLATE: 3w3m
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 2 (A) | polymer(polypeptide(L)) [751 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [751 aa] | Toll-like receptor 8 :TLR8_HUMAN | 182Y 183F 184N 185K 261F 262N 263A 264P 265F 266P 346F 405F 427E 460E 490L 491N 492S 494F 514A 516S 541R 566H 570I 571A 572G 573V 574T 598T 600T 601D 622I 627D 628D 629N 630R 810R (identity: 100.0 %/95.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3w3m_A_2 identity=95.3% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
:********************************************************************** ******************:
3w3m_A_2 9:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108
SecStr : SSEEEEETTEEEEE TTS SS S TT SEEE S EE SSSSTT S EEE S S ------------ EE TTTTTT S EE:
ExpBur :ebeebbbeeeeeebebbebeebebeebbeebeeebbebebbebebeebeeebbeebeebeebbbbebeee------------ebebeebbbeebeebeeb:
queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230
:****************************************************************************************************:
3w3m_A_2 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208
SecStr :E TTS SS SS TT SEEE SS EE TTTTTT TT EEE SSS TTS EE TTSSTT SS EEE SS SS SS TT SEEE T:
ExpBur :bbbebebeebbeebbebbebbbbbbbbbeebbeebbbebeebebbebbbbbbeeeeeeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebb:
Contact : bbbb
queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330
:****************************************************************************************************:
3w3m_A_2 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308
SecStr :TS EE SSSSTT SS EEE TTSS TT SS SGGG EE TTTTTT S EEE TTS SS GGGSTT TT EEE SS HHHHHS :
ExpBur :bbebeebeeeebeebeebebbbbbbbbbbeeeeebeeeebeebeebebeeebbeebeebeebbbbbbbbeebeebbbeebeebebbbbbebebbebbeeb:
Contact : bbbbbb
queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430
:****************************************************************************************************:
3w3m_A_2 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408
SecStr :TTGGG TT EEE S TT SB GGGGG SS EEE S SEE GGGSGGGTT TT EEE SS EE TTSGGGSSS EEE SS :
ExpBur :ebbeebeebeebbbbbbbeeeeeeeebebbebbeebeebebbbbbbbbbbebeeebbebbbebeebebbbbbebebeebebebbeebeebeebbbbebeb:
Contact : b b b
queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530
:*** ************************************************************************:
3w3m_A_2 409:SPLXXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508
SecStr : ------------------------- S TTS SSS S SS HHHHTTS EEE SS S TTTTTT SEEE TT B S TTTTST:
ExpBur :eee-------------------------eeeebeeeebeeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebe:
Contact : b bbb b b b
queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630
:****************************************************************************************************:
3w3m_A_2 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608
SecStr :T SEEE SS B TTTTTT SS EEE TT TTTTT SSS GGGGG SS EEE TT SS BSS EEE SS HHHHT TT T:
ExpBur :ebebbbbbebebbbeeeebbebbeebbbbbbbebbeebeeeeeebbbbbbeebeebeebbbbebebebbbeeeebebebbeebbbbbbbbeebbeeebee:
Contact : b b bbbbb b bb b bbbb
queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730
:****************************************************************************************************:
3w3m_A_2 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708
SecStr :TTTTTTTBSS EEE TTS S HHHHHTS TT SEEE SS GGGGGG TT EEE SS S HHHH S EEE SS TT:
ExpBur :bbebbebbeebeebbbbebebeebbeebbebbbebbeebbbbebebeebebebbeebeebebbbbeebebeebbeebbebbebbebbbbbebebeebbee:
queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818
:****************************************************************************************:
3w3m_A_2 709:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796
SecStr :SSTT EEE SS TTTS SS EEE TT B SGGGHHHHHHHHH SSSB TTSSBB SSTTTTTSBTTS :
ExpBur :bbbebebbebbbbbebebeebeeebbebeeeeebeebbbbebebebeeebeebeebbeeeeebebbebbbbebbeeeebeeebbeeee:
Contact : b
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[assembly_id:1]
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