Protein Model on 5awa_A_1_A_2
(TEMPLATE: 
5awa
)Protein Model on 5awa_A_1_A_2
(TEMPLATE: 5awa
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [735 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | A 2 (A) | polymer(polypeptide(L)) [735 aa] | Toll-like receptor 8 :TLR8_HUMAN | 182Y 183F 184N 261F 262N 263A 264P 265F 266P 405F 427E 460E 490L 491N 494F 514A 516S 541R 543D 566H 567Y 569R 570I 571A 572G 573V 574T 598T 600T 601D 622I 627D 628D 629N 630R (identity: 100.0 %/93.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5awa_A_1 identity=93.6% |
queryA 32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131
:********** ******************************************************** *******************:
5awa_A_1 10:RSYPCDEKKQXXSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNXXXXXXXXXXXXXGLNITDGAFLNLKNLRELL: 109
SecStr : SSSEEEE -- EEEE TTS SS S TT EEE SS EE GGGSTT S EEE SS ------------- EE TTSSTT SS EEE:
ExpBur :eeebbbeeee--ebbbebeebebeebbeebeeebbebebbebebeebeeeebeebeebeebbbbbbee-------------ebebeebbbeebeebeebb:
queryA 132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231
:****************************************************************************************************:
5awa_A_1 110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209
SecStr : SS SS SS TT SEEE TTS EE HHHHTS TT SEEE SSS TT S EE TTTTTT TT EEE SS SS S TT SEEE TT:
ExpBur :bbbbebeebbbebbeebbbbbbbbbebbebbeebbbebeebeebebbbbbeeeeeeeebebeebbbeebeebebbbbbbbbbeebbeebbebbeebebbb:
Contact : bbb
queryA 232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331
:****************************************************************************************************:
5awa_A_1 210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309
SecStr :S EE TTSSTT TT SEEE TTSS TT SS GGG EE TTSSTT TT EEE TTS GGGGTT TT EEE TTS HHHHHS G:
ExpBur :bebeebbeebbeebeebbbbbbbbbbbbbeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebebbbbeebeebebbbbbebebbebbeebe:
Contact : bbbbbb
queryA 332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431
:****************************************************************************************************:
5awa_A_1 310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409
SecStr :GGGG TT EEE S TT SB GGGGG TT EEE TT SEE SGGGGGGTT TT EEE SS EE GGGGTTSS EEE SS :
ExpBur :bbeebeebeebbbbbbbeeeeeeeebebbeebeebeebebbbbbbbbbeebeeebbebbbebeebebbbbbebebeebebebbeebeebeebbbbebebe:
Contact : b b
queryA 432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531
:* **************************************************************************:
5awa_A_1 410:PXXXXXXXXXXXXXXXXXXXXXXXXXDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509
SecStr : ------------------------- SS TTS SSS S SS HHHHTTS EEE SS S TTTTTT SEEE SS S TTTTSTT:
ExpBur :e-------------------------eeebebeeeebeeeeeebeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebee:
Contact : b bb b b b
queryA 532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631
:****************************************************************************************************:
5awa_A_1 510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609
SecStr : EEE SS TTTTTT TT EEE S HHHHT TTS GGGGG TT EEE TTS SS BSS EEE TTS HHHHT TT TT:
ExpBur :bebbbbbebebebeeeebbebbeebbbbbbbebeeebeeeeeebbbbbbeebeebeebbbbebebebbbeeeebebebbeebbbbbbbbeebbeeebeeb:
Contact : b b bb bbbbbb b bb b bbbb
queryA 632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731
:****************************************************************************************************:
5awa_A_1 610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709
SecStr :TTTTTTBTT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S GGGT S EEE SS TTT:
ExpBur :bebbeebeebeebbbbebebeebeeebbebbbeebeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbebbebbbbbebebeebbebb:
queryA 732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVS: 816
:************************* ******************************************* *******:
5awa_A_1 710:LSEVSSLKHLDLSSNLLKTINKSALXXXXXTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICAXXXXXRGKSIVS: 794
SecStr :TTS TT EEE SS S GGG ----- SEEE TT B SGGGHHHHHHHHH TTSB GGGSBB ----- SBTT :
ExpBur :bbebeebeebbbbebebeebeeebe-----eebeebbbbebebeeeeebbebeebbeeeeebebbebbebebe-----eeebbee:
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[assembly_id:1]
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