#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [378 aa] | Replicase polyprotein 1ab :R1AB_CVMA5 | |
2 | b | A 2 (A) | polymer(polypeptide(L)) [378 aa] | Replicase polyprotein 1ab :R1AB_CVMA5 | 933V 934C 935K 966Q(N) 996Y(R) 997E(K) 1010T 1012N(G) 1014Q(S) 1017H 1019K(T) 1029C(L) 1031D 1034L(N) 1036T(N) 1037K 1038S(V) 1039S 1040E 1042K 1043G 1044P(N) (identity: 50.0 %/31.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4ypt_A_1 identity=31.1% |
queryA 750:IKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSI: 849 : * *** * * * * ** *** ** * * * * * * * * : 4ypt_A_1 87:VDVLCTVDGVNFRSCCVAEGEVFGKTLGSVFCDGINVTKVRCSAIYKGKVFFQYSDLSEADLVAVKDAFGFDEPQLLKYYTMLGMCK-WPVVVCGNYFAF: 185 SecStr :EEEEEESSSSS EEEEEETTSBHHHHH SEEETTEE TT B GGGTT EEEE SS HHHHHHHHHHT HHHHHHHHHHHHH - EEEETTEEEE: ExpBur :bebebbbbbeeeeebebbeebebeeebeebbbeeeebbeeebeeebeeeebbebeebeeeeeebbeebbbbeeebbeebbebbeebe-beeeebeeebbb: queryA 850:KWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEA: 949 :* ** * * * ** *** * * * * * * ** * * * * * * *** ** * *** *: 4ypt_A_1 186:KQSNNNUYINVACLMLQHLSLKFPKWQWQEAWNEFRSGKPLRFVSLVLAKGSFKFNEPSDSIDFMRVVLREADLSGATCNLEFVCK-CGVKQEQRKGVDA: 284 SecStr : TT HHHHHHHHHHTT SSHHHHHHHHHHHTT HHHHHHHHHHS TT HHHHHHHHHHHS TT EEEEEEEET-TEEEEEEEETHHH: ExpBur :eeeeebbbbbbbbbbbeebebebeeebbbebbeebeeeebebbbbbbbbeeebeeeeebebbebbebbbebbebeebbbebebebe-eeeeeeeeebbeb: Contact : bbb queryA 950:VMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDVF:1049 :** *** * * **** * ** * * * * ** *** * * * * ** ** ** : 4ypt_A_1 285:VMHFGTLDKGDLVRGYNIACTCGSKLV-HCTQFNVPFLICSNTPEGRKLPDDVVA-ANIFTGG-SVGHYTHVKCKPKYQLYDACNVNKVSEAKGNFTDCL: 381 SecStr :HEEES S HHHHHH EEEEETTEEEEE-EEEEEE S EEEEEEEE TT SE-EEEEE T-TTTEEEEEE SSS EEEETTEEEE S EEEEE: ExpBur :bbbebbbbbbebeeebeeeeeeeeeeb-ebeebebebbbbbbeeeeeebbeebeb-bbbeeee-eebebbbbbbeeeeeebeeeeeeeeeeeeeebbbbb: Contact : b bb b b b b b b b b bbbbb bbb queryA 1050:YKEN:1053 :* *: 4ypt_A_1 382:YLKN: 385 SecStr :E S : ExpBur :beee: |