Protein Model on 8cmr_B_1_C_1 (TEMPLATE: 8cmr )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ISG15_HUMAN) B 1 (B) polymer(polypeptide(L)) [150 aa] Polyubiquitin-B :B4DV12_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [240 aa] OTU domain-containing protein :F8L9T9_SIMNZ 8K 16Q(T) 18S(E) 19L(V) 20S(E) 33T(Q) 34Q(D) 35K 36I(E) 37G 44R 46A(I) 47V(F) 50S(A) 51G 64G(N) 67P(K) 68G(E) 70T 72L(H) 74V (identity: 33.3 %/33.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8cmr_B_1 identity=33.8%
queryA         7:VKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLTQTVAH: 106
                :** * *         *      ** *  * *    ****     *  * *   *        **  **         * *    *   * **    *   :
8cmr_B_1       5:VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF--AGKQLEDGRTLSDYNIQKESTLHLVL-RXXGGMQIFVKTLTGKTITLEVEPSDTIEN: 101
SecStr          :EE TTS EEEEE  TT BHHHHHHHHHHHH   GGG  EEE--TTEE  TTSBTTTTT  TT EEEE  - --  EEEEEE TT  EEEEEE TT BHHH:    
ExpBur          :bebeeeeebebebeeebebeebbeebeeeeebeeeebebeb--eeeebeeeebbeebebeeebebebee-e--eebebbbebeeeeebebebeeebebee:    
Contact         : b       b bbb            bbbbb      b bb  bb            b  bb b b b                                

queryA       107:LKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRGG: 157
                : *      **   *   * * ** ***   *  *     **    ******:
8cmr_B_1     102:VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG: 152
SecStr          :HHHHHHHHH   GGGEEEEETTEE  TTSBTGGGT  TT EEEEEE     :    
ExpBur          :bbeebeeeeeeebeebebebeeeebeeeeebeebebeeebebebeeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123