[pdbjlvh2]Protein Model on 8t48_A

Protein Model on 8t48_A_1 (TEMPLATE: 8t48 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(ISG15_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [155 aa]	Di-Ubiquitin :UBC_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8t48_A_1 identity=33.8%

queryA         7:VKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLTQTVAH: 106
                :** * *         *      ** *  * *    ****     *  * *   *        **  **         * *    *   * **    *   :
8t48_A_1      25:VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF--AGKQLEDGRTLSDYNIQKESTLHLVL-RLRGGMQIFVKTLTGKTITLEVEPSDTIEN: 121
SecStr          :EEETTS EEEEEE TT BHHHHHHHHHHHH   GGGEEEEE--TTEE  TTSBTTTTT  TTEEEEEEE-   S EEEEEEETTS EEEEEE TT BHHH:    
ExpBur          :bebeeeeebebebeeebebeebbeebeeeeebeeeebebee--eeeebeeeebbeebebeeebebebee-eeeeebebebebeeeeebebebeeebebee:    

queryA       107:LKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRGG: 157
                : *      **   *   * * ** ***   *  *     **    ******:
8t48_A_1     122:VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG: 172
SecStr          :HHHHHHHHH   GGGEEEEETTEE  TTSBGGGGT  TT EEEEEE     :    
ExpBur          :bbeebeeeeebebeebebbbeeeebeeeebbeebebeeebebebeeeeeee:

Protein Model on 8t48_A_1 (TEMPLATE: 8t48 )

Input Residue Numbers for Focused Sites