Protein Model on 5b83_A_1_B_1 (TEMPLATE: 5b83 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ISG15_HUMAN) A 1 (A) polymer(polypeptide(L)) [302 aa] tetra ubiquitin :UBC_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [59 aa] Optineurin :OPTN_HUMAN 87R(K) 89N(L) 123W(R) 125T(I) 149F(H) 151N(V) 152L 153R 154L 155R (identity: 40.0 %/33.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5b83_A_1 identity=33.3%
queryA         2:GWDLTVKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLT: 101
                :*    ** * *         *      ** *  * *    ****     *  * *   *        **  **         * *    *   * **   :
5b83_A_1      76:GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF--AGKQLEDGRTLSDYNIQKESTLHLVL-RLRGGMQIFVKTLTGKTITLEVEPS: 172
SecStr          :SEEEEEE TTS EEEEEE TT BHHHHHHHHHHHH   GGGEEEEE--TTEE  TTSBTTTTT  TT EEEEEE-  TT EEEEEE TTS EEEEEE TT:    
ExpBur          :ebbbebebeeeeebebebeeebbbeebbeebeeeeebeeeebebeb--eeeebbbeebbeebebeeebebebee-beeebbbbebebeeeeebbbebeee:    
Contact         :                                                                                     b b            

queryA       102:QTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRGG: 157
                : *    *      **   *   * * ** ***   *  *     **    ******:
5b83_A_1     173:DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG: 228
SecStr          : BHHHHHHHHHHHH   GGGEEEEETTEE  TT BTTTTT  TT EEEEEE S  S:    
ExpBur          :bbbeebbeebeeeeebbeebbbbeeeeeebeeeebbeebebeeebebebeeeeebe:    
Contact         :                     b b                       b bbbbb                                              


Input Residue Numbers for Focused Sites

ex) 2,15,123