[pdbjlvh2]Protein Model on 5jgh_J

Protein Model on 5jgh_J_1 (TEMPLATE: 5jgh )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(HMGB1_HUMAN)	J 1 (J)	polymer(polypeptide(L)) [151 aa]	ARS-binding factor 2, mitochondrial :ABF2_YEAST

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5jgh_J_1 identity=30.3%

queryA         1:MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPS: 100
                :  *  ** *    * *    *  *    *  *       * **   * *    *  * *     *     *              ** *     ** *  :
5jgh_J_1      18:LIKQGPKRP---TSAYFLYLQDHRSQFVKENP--TLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSEYQK-----------AKKEFDEKLPPKKPAG: 101
SecStr          :HHHTS    ---  HHHHHHHHHHHHHHHHST--TS HHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHH-----------HHHHHHHTS       :    
ExpBur          :eeeebeeee---eebbebbbeeeeeebeeeee--eeeeeebeeebeeebeebeeeebeebeeeeeeeeeebee-----------eeeeeeeebeeeeeee:    

queryA       101:AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK: 165
                : *     * *      **  *  *  *  *  *       *  *          * * *  * * :
5jgh_J_1     102:PFIKYANEVRSQVFAQHPDKSQLDLMKIIGDKWQSLDQSIKDKY-------IQEYKKAIQEYNAR: 159
SecStr          :HHHHHHHHHHHHHHHH TTS HHHHHHHHHHHHHHS HHHHHHH-------HHHHHHHHHHHTTS:    
ExpBur          :eeeebbeebeeebeeeeeeeeeeebeeebeeebeebeeeebeeb-------eeeeeeeeeebeee:

Protein Model on 5jgh_J_1 (TEMPLATE: 5jgh )

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