Protein Model on 6hc3_J_1_L_1
(TEMPLATE: 
6hc3
)Protein Model on 6hc3_J_1_L_1
(TEMPLATE: 6hc3
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HMGB1_HUMAN) | J 1 (J) | polymer(polypeptide(L)) [191 aa] | Transcription factor A, mitochondrial :TFAM_HUMAN | |
| 2 | b | L 1 (L) | polymer(polydeoxyribonucleotide) [22 base] | DNA (5'-D(*TP*TP*TP*GP*GP*TP*GP*GP*AP*AP*AP*TP*TP*TP*TP*TP*TP*GP*TP*TP*AP*G)-3') | 14S 15S 16Y 17A(L) 20V(S) 39S(T) 42S(I) 43K(R) 46S(A) 49W 50K(R) 61E(Q) 64A(Y) 68K(W) 84E(M) 87K 88K 96K 97R 99P(R) 103F(N) 106C(V) 107S(A) 110R(F) 118P 123G(Q) 126A(L) (identity: 33.3 %/29.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6hc3_J_1 identity=29.7% |
queryA 6:PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY---IPP-----------------KGET: 85
:**** *** * * *** * ** * * * * * * * *:
6hc3_J_1 20:PKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMT: 114
SecStr : --- HHHHHHHHHHHHHHHH TTS H--HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHH:
ExpBur :beeb---eeeeebbbeebeeebeeeeeeeee--eebeeebbeebeeeeeeeeeebeeeeeeeeeebeeebeebeeebeeeeeeebeeeeeeeeeeeeeee:
Contact : bbbb b b bb b bb b b b b b
queryA 86:KKK-FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY: 162
:*** **** ** * ** * * * * * * * * * :
6hc3_J_1 115:KKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSW: 188
SecStr :HHHHHHHTT HHHHHHHHHSTT S SSH----HHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHHHHHHHH:
ExpBur :eeeebeeeeebeeeeebeebbbeeeeeebeeeee----eebeeebeeebeeeeeeeeeebeeebeebeebeeeebeeb:
Contact : bb bb b b bb b b b b
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[assembly_id:4]
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