Protein Model on 6cij_G_1_K_1
(TEMPLATE: 
6cij
)Protein Model on 6cij_G_1_K_1
(TEMPLATE: 6cij
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HMGB1_HUMAN) | G 1 (N) | polymer(polypeptide(L)) [133 aa] | High mobility group protein B1 :HMGB1_HUMAN | |
| 2 | b | K 1 (M) | polymer(polydeoxyribonucleotide) [41 base] | DNA (41-MER) | 14S 15S 16Y 38F 42S 46S 49W 86K 97R 103F 110R 122I (identity: 100.0 %/88.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6cij_G_1 identity=88.7% |
queryA 9:PRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSE: 108
:****************************************** ******************** ***********************:
6cij_G_1 9:PRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKXXXXKEKGKFEDMAKADKARYEREXXXXXXXXXXXKKKFKDPNAPKRPPSAFFLFCSE: 108
SecStr : TTHHHHHHHHHHHHHS TT TT SHHHHTTHHHHT ---- HHHHHHHHTTHHHHTT ----------- S S HHHHHHHH:
ExpBur :eeeeeeeeebbeeebbeeeeeeeeeeeeeeeebeeebeebee----eebeeebeebeeeeeebeee-----------eeeeeeeeeeeeeeebeebbbee:
Contact : bbb b b b b b b b
queryA 109:YRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKD: 158
:****************************** ******************:
6cij_G_1 109:YRPKIKGEHPGLSIGDVAKKLGEMWNNTAAXXKQPYEKKAAKLKEKYEKD: 158
SecStr :HHHHHHHH TT HHHHHHHHHHHHTTS -- HHHHHHHHHHHHHHHH :
ExpBur :eeeeeeeeeeeeeeeebeebbbeeeeeeee--eeebeebbeeeeeeeeee:
Contact : b b
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[assembly_id:1]
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