Protein Model on 5jgh_G_1_I_1
(TEMPLATE: 
5jgh
)Protein Model on 5jgh_G_1_I_1
(TEMPLATE: 5jgh
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HMGB1_HUMAN) | G 1 (G) | polymer(polypeptide(L)) [156 aa] | ARS-binding factor 2, mitochondrial :ABF2_YEAST | |
| 2 | b | I 1 (I) | polymer(polydeoxyribonucleotide) [22 base] | DNA (5'-D(*TP*TP*AP*TP*AP*TP*AP*AP*TP*AP*TP*AP*AP*AP*AP*TP*AP*AP*TP*AP*AP*A)-3') | 96K 97R(K) 103F(I) 107S(N) 110R 122I(Q) 126A(M) (identity: 28.6 %/30.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5jgh_G_1 identity=30.3% |
queryA 1:MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPS: 100
: * ** * * * * * * * * ** * * * * * * * ** * ** * :
5jgh_G_1 18:LIKQGPKRP---TSAYFLYLQDHRSQFVKENP--TLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSEYQK-----------AKKEFDEKLPPKKPAG: 101
SecStr :HHHTS --- HHHHHHHHHHHHHHHHSS--S HHHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHS :
ExpBur :eeeebeeee---eebbebbbeeeeeebeeeee--eeeeeebeeebeeebeebeeeeeeebeeeeeeeeeebee-----------eeeeeeeebeeeeeee:
Contact : bb
queryA 101:AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK: 165
: * * * ** * * * * * * * * * * * * :
5jgh_G_1 102:PFIKYANEVRSQVFAQHPDKSQLDLMKIIGDKWQSLDQSIKDKY-------IQEYKKAIQEYNAR: 159
SecStr :HHHHHHHHHHHHHHHH TT HHHHHHHHHHHHHHS HHHHHHH-------HHHHHHHHHHHHHH:
ExpBur :eeeebbeebeeebeeeeeeeeeeebeebbeeebeebeeeebeeb-------eeeeeeebeebeee:
Contact : b b b b b
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[assembly_id:2]
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