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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HMGB1_HUMAN) | G 1 (G) | polymer(polypeptide(L)) [156 aa] | ARS-binding factor 2, mitochondrial :ABF2_YEAST | |
2 | b | H 1 (H) | polymer(polydeoxyribonucleotide) [22 base] | DNA (5'-D(*TP*TP*TP*AP*TP*TP*AP*TP*TP*TP*TP*AP*TP*AP*TP*TP*AP*TP*AP*TP*AP*A)-3') | 97R(K) 101A(P) 102F 123G(L) 126A(M) 127K 130G 133W 134N(Q) 152K(I) 155Y 156E(K) 159I (identity: 46.2 %/30.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5jgh_G_1 identity=30.3% |
queryA 1:MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPS: 100 : * ** * * * * * * * * ** * * * * * * * ** * ** * : 5jgh_G_1 18:LIKQGPKRP---TSAYFLYLQDHRSQFVKENP--TLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSEYQK-----------AKKEFDEKLPPKKPAG: 101 SecStr :HHHTS --- HHHHHHHHHHHHHHHHSS--S HHHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHS : ExpBur :eeeebeeee---eebbebbbeeeeeebeeeee--eeeeeebeeebeeebeebeeeeeeebeeeeeeeeeebee-----------eeeeeeeebeeeeeee: Contact : b queryA 101:AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK: 165 : * * * ** * * * * * * * * * * * * : 5jgh_G_1 102:PFIKYANEVRSQVFAQHPDKSQLDLMKIIGDKWQSLDQSIKDKY-------IQEYKKAIQEYNAR: 159 SecStr :HHHHHHHHHHHHHHHH TT HHHHHHHHHHHHHHS HHHHHHH-------HHHHHHHHHHHHHH: ExpBur :eeeebbeebeeebeeeeeeeeeeebeebbeeebeebeeeebeeb-------eeeeeeebeebeee: Contact :bb b bb b bb b bb b |