Protein Model on 6cij_G_1_A_1 (TEMPLATE: 6cij )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HMGB1_HUMAN) G 1 (N) polymer(polypeptide(L)) [133 aa] High mobility group protein B1 :HMGB1_HUMAN
2 b A 1 (A) polymer(polypeptide(L)) [614 aa] V(D)J recombination-activating protein 1 :RAG1_MOUSE 87K 90K 91D (identity: 100.0 %/88.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6cij_G_1 identity=88.7%
queryA         9:PRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSE: 108
                :******************************************    ********************           ***********************:
6cij_G_1       9:PRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKXXXXKEKGKFEDMAKADKARYEREXXXXXXXXXXXKKKFKDPNAPKRPPSAFFLFCSE: 108
SecStr          :      TTHHHHHHHHHHHHHS TT TT SHHHHTTHHHHT ----   HHHHHHHHTTHHHHTT -----------     S  S      HHHHHHHH:    
ExpBur          :eeeeeeeeebbeeebbeeeeeeeeeeeeeeeebeeebeebee----eebeeebeebeeeeeebeee-----------eeeeeeeeeeeeeeebeebbbee:    
Contact         :                                                                              b  bb                 

queryA       109:YRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKD: 158
                :******************************  ******************:
6cij_G_1     109:YRPKIKGEHPGLSIGDVAKKLGEMWNNTAAXXKQPYEKKAAKLKEKYEKD: 158
SecStr          :HHHHHHHH TT  HHHHHHHHHHHHTTS  -- HHHHHHHHHHHHHHHH :    
ExpBur          :eeeeeeeeeeeeeeeebeebbbeeeeeeee--eeebeebbeeeeeeeeee:    


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