Protein Model on 6cij_G_1_A_1
(TEMPLATE: 
6cij
)Protein Model on 6cij_G_1_A_1
(TEMPLATE: 6cij
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HMGB1_HUMAN) | G 1 (N) | polymer(polypeptide(L)) [133 aa] | High mobility group protein B1 :HMGB1_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [614 aa] | V(D)J recombination-activating protein 1 :RAG1_MOUSE | 87K 90K 91D (identity: 100.0 %/88.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6cij_G_1 identity=88.7% |
queryA 9:PRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSE: 108
:****************************************** ******************** ***********************:
6cij_G_1 9:PRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKXXXXKEKGKFEDMAKADKARYEREXXXXXXXXXXXKKKFKDPNAPKRPPSAFFLFCSE: 108
SecStr : TTHHHHHHHHHHHHHS TT TT SHHHHTTHHHHT ---- HHHHHHHHTTHHHHTT ----------- S S HHHHHHHH:
ExpBur :eeeeeeeeebbeeebbeeeeeeeeeeeeeeeebeeebeebee----eebeeebeebeeeeeebeee-----------eeeeeeeeeeeeeeebeebbbee:
Contact : b bb
queryA 109:YRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKD: 158
:****************************** ******************:
6cij_G_1 109:YRPKIKGEHPGLSIGDVAKKLGEMWNNTAAXXKQPYEKKAAKLKEKYEKD: 158
SecStr :HHHHHHHH TT HHHHHHHHHHHHTTS -- HHHHHHHHHHHHHHHH :
ExpBur :eeeeeeeeeeeeeeeebeebbbeeeeeeee--eeebeebbeeeeeeeeee:
|
[assembly_id:1]
[help]