CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HMGB1_HUMAN) | D 1 (J) | polymer(polypeptide(L)) [73 aa] | High mobility group protein D :HMGD_DROME | |
2 | b | N 1 (L) | polymer(polydeoxyribonucleotide) [11 base] | DNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3' | 96K 97R 99P(L) 121S(K) 122I(V) (identity: 40.0 %/44.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3nm9_D_1 identity=44.3% |
queryA 95:PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG: 166 :**** ** * * ** * ** *** ** * * ** * **** * * * *: 3nm9_D_1 4:PKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEWEAKAAKAKDDYDRAVKEFEANG: 73 SecStr : HHHHHHTTTHHHHHHHSTT HHHHHHHHHHHHT--T S HHHHHHHHHHHHHHHHHHHHHTT : ExpBur :eeeeeebeebbbeebeeebeeeeeebeeeebeeebbeebe--eeeeeeebeeebeeeeeebeeeeeeeeeee: Contact : bb b bb |