Protein Model on 6hb4_D_1_E_1
(TEMPLATE: 
6hb4
)Protein Model on 6hb4_D_1_E_1
(TEMPLATE: 6hb4
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HMGB1_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [194 aa] | Transcription factor A, mitochondrial :TFAM_HUMAN | |
| 2 | b | E 1 (E) | polymer(polydeoxyribonucleotide) [22 base] | DNA (5'*CP*TP*GP*TP*GP*CP*AP*GP*AP*CP*AP*TP*TP*CP*AP*AP*TP*TP*GP*TP*TP*A)-3') | 7K 13M(V) 16Y 17A(L) 20V(S) 21Q(K) 24R(L) 36V(T) 39S(T) 42S(I) 84E(M) 87K 88K 90K(T) 97R 98P 100S 102F(Y) 118P 123G(Q) 126A(L) 127K 130G(K) 133W 152K(E) 155Y 172K(R) 173K(R) 174G(T) 175V(I) (identity: 36.7 %/28.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6hb4_D_1 identity=28.6% |
queryA 6:PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY---IPP-----------------KGET: 85
:**** *** * * *** * ** * * * * * * * *:
6hb4_D_1 9:PKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMT: 103
SecStr : --- HHHHHHHHHHHHHHHHSTTS H--HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHH:
ExpBur :eeee---eebeeebbeebeeebeeeeeebee--eebeeebbeebeebeeeebeeeeeeeeeeeeebeeebeebeeebeeeeeeebeeeeeeeeeeeeeee:
Contact : b b bb bb b b b b bb bb b
queryA 86:KKK-FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK----GKPDAAKKGV: 175
:*** **** ** * ** * * * * * * * * * * * :
6hb4_D_1 104:KKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTI: 194
SecStr :HHHHHHHTT HHHHHHHHHTTT SSH----HHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT GGGS S :
ExpBur :eeeebeebeebeebeebeebbbeeeeeebeeeee----eebeeebeeebeebeeeeeeebeeebeebeebeeeebeebbeebeeeeeeebeeeee:
Contact : bb b bb b b b b bb b b b b bbbb
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[assembly_id:2]
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