Protein Model on 6erp_D_1_E_1
(TEMPLATE: 
6erp
)Protein Model on 6erp_D_1_E_1
(TEMPLATE: 6erp
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HMGB1_HUMAN) | D 1 (G) | polymer(polypeptide(L)) [192 aa] | Transcription factor A, mitochondrial :TFAM_HUMAN | |
| 2 | b | E 1 (H) | polymer(polydeoxyribonucleotide) [46 base] | Non-Template DNA | 14S 15S 16Y 17A(L) 20V(S) 39S(T) 42S(I) 43K(R) 46S(A) 49W 50K(R) 61E(Q) 64A(Y) 68K(W) 88K 96K 97R 99P(R) 103F(N) 106C(V) 107S(A) 110R(F) 118P 123G(Q) 126A(L) (identity: 32.0 %/29.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6erp_D_1 identity=29.3% |
queryA 4:GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY---IPP-----------------KG: 83
: **** *** * * *** * ** * * * * * * * :
6erp_D_1 8:SSPKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKA: 102
SecStr :HS --- HHHHHHHHHHHHHHHH SSS H--HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHH:
ExpBur :eebeeb---eeeeeebbeebeeebeeeeeeeee--eebeeebbeebeeeeeeeeeeeeeeeeeeeeebeeebeebeeebeeeeeeebeeeeeeeeeeeee:
Contact : bbbb b b bb b bb b b b b
queryA 84:ETKKK-FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY: 162
: **** **** ** * ** * * * * * * * * * :
6erp_D_1 103:MTKKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSW: 178
SecStr :HHHHHHHHHT HHHHHHHHHTTTS SSH----HHHHHHHHHHHHT TTTTHHHHHHHHHHHHHHHHHHHHH:
ExpBur :eeeeeeeeeeeeeeeeeebeebbbeeeeeebeeeee----eebeeebeeebeebeeeebeebeeebeebeeeeeeebeeb:
Contact : b bb b b bb b b b b
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[assembly_id:2]
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