Protein Model on 7lbw_B_1_F_1
(TEMPLATE: 
7lbw
)Protein Model on 7lbw_B_1_F_1
(TEMPLATE: 7lbw
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HMGB1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [190 aa] | Transcription factor A, mitochondrial :TFAM_HUMAN | |
| 2 | b | F 1 (F) | polymer(polydeoxyribonucleotide) [22 base] | DNA (5'-D(P*TP*AP*GP*CP*CP*TP*TP*TP*CP*TP*AP*TP*TP*AP*GP*CP*TP*CP*TP*TP*AP*G)-3') | 14S 15S 16Y 17A(L) 20V(S) 39S(T) 42S(I) 43K(R) 46S(A) 49W 50K(R) 61E(Q) 64A(Y) 68K(W) 84E(M) 85T 88K (identity: 35.3 %/29.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7lbw_B_1 identity=29.7% |
queryA 6:PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY---IPP-----------------KGET: 85
:**** *** * * *** * ** * * * * * * * *:
7lbw_B_1 8:PKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMT: 102
SecStr : --- HHHHHHHHHHHHHHHH TTS H--HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHHHHH:
ExpBur :eeee---eeeeeebbeebeeebeeeeeeeee--eebeeebbeebeebeeeebeeeeeeeeeeeeebeeebeebeeebeeeeeeebeeeeeeeeeeeeeee:
Contact : bbbb b b bb b bb b b b bb bb
queryA 86:KKK-FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY: 162
:*** **** ** * ** * * * * * * * * * :
7lbw_B_1 103:KKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSW: 176
SecStr :HHHHHHHTT HHHHHHHHHSTTS SSH----HHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHHHHHHHH:
ExpBur :eeeeeeeeeebeeeeebeebbbeeeeeebeeeee----eebeebbeeebeebeeeeeeebeeebeebeebbeeebeeb:
Contact : b
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[assembly_id:1]
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