Protein Model on 3tq6_B_1_F_1
(TEMPLATE: 
3tq6
)Protein Model on 3tq6_B_1_F_1
(TEMPLATE: 3tq6
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HMGB1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [190 aa] | Transcription factor A, mitochondrial :TFAM_HUMAN | |
| 2 | b | F 1 (F) | polymer(polydeoxyribonucleotide) [22 base] | DNA (5'-D(*GP*TP*TP*AP*GP*TP*TP*GP*GP*GP*GP*GP*GP*TP*GP*AP*CP*TP*GP*TP*TP*A)-3') | 14S 15S 16Y 17A(L) 20V(S) 39S(T) 42S(I) 43K(R) 46S(A) 49W 50K(R) 61E(Q) 64A(Y) 84E(M) 85T 87K 88K 96K 97R 99P(R) 103F(N) 106C(V) 107S(A) 110R(F) 118P 123G(Q) 126A(L) (identity: 37.0 %/29.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3tq6_B_1 identity=29.7% |
queryA 6:PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY---IPP-----------------KGET: 85
:**** *** * * *** * ** * * * * * * * *:
3tq6_B_1 10:PKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMT: 104
SecStr : --- HHHHHHHHHHHHHHHH TTS H--HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHH:
ExpBur :beee---eebeeebbeebeeebeeeeeeeee--eebeeebbeebeeeeeeebeeeeeeeeeeeeebeeebeebeeebeeeeeeebeeeeeeeeeeeeeee:
Contact : bbbb b b bb b bb b b b bb
queryA 86:KKK-FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY: 162
:*** **** ** * ** * * * * * * * * * :
3tq6_B_1 105:KKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSW: 178
SecStr :HHHHHHHTT HHHHHHHHHTTTSS SSH----HHHHHHHHHHHTT HHHHHHHHHHHHHHHHHHHHHHHHH:
ExpBur :eeeeeeeeeebeebeebeebbbeeeeeebeeeee----eebeebbeeebeebeeeeeeebeeebeebeeebeeebeeb:
Contact : bb bb b b bb b b b b
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[assembly_id:2]
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