[pdbjlvh2]Protein Model on 7lbx_A

Protein Model on 7lbx_A_1 (TEMPLATE: 7lbx )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(HMGB1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [190 aa]	Transcription factor A, mitochondrial :TFAM_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7lbx_A_1 identity=29.7%

queryA         6:PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY---IPP-----------------KGET:  85
                :****    ***  *        *   ***     *       **       *    *   *    *  *         *                 *  *:
7lbx_A_1       8:PKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMT: 102
SecStr          :    ---  HHHHHHHHHHHHHHHH TTS H--HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeeb---eebeeebbeeeeeebeeeeeebee--eebeeebbeebeebeeeebeeeeeeeeeeeeebeeebeebeeebeeeeeeebeeeeeeeeeeeeeee:    

queryA        86:KKK-FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY: 162
                :***       **** **      *     **  *        *   * * *     *  *   *      *       :
7lbx_A_1     103:KKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSW: 176
SecStr          :HHHHHHHTT       HHHHHHHHHTTTS  SSH----HHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeeebeeeeebeebeebeebbbeeeeeebeeeee----eebeeebeeeeeebeeeeeeebeeebeebeebbeeebeeb:

Protein Model on 7lbx_A_1 (TEMPLATE: 7lbx )

Input Residue Numbers for Focused Sites