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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
FOCUSED SITES | template(6hb4_A auth_asym_id:A) | ||||||
SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
179 | E | 198 | 239 | R | e | 79.8 |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(HMGB1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [197 aa] | Transcription factor A, mitochondrial :TFAM_HUMAN |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6hb4_A_1 identity=28.9% |
queryA 6:PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY---IPP-----------------KGET: 85 :**** *** * * *** * ** * * * * * * * *: 6hb4_A_1 9:PKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMT: 103 SecStr : --- HHHHHHHHHHHHHHHHSTTS H--HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHH: ExpBur :eeee---eebeeebbeebeeebeeeeeeeee--eebeeebbeebeeeeeeebeeeeeeeeeeeeebeeebeebeeebeeeeeeebeeeeeeeeeeeeeee: queryA 86:KKK-FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK----GKPDAAKKGVVKAEK: 180 :*** **** ** * ** * * * * * * * * * * * * *: 6hb4_A_1 104:KKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTIKKQRK: 199 SecStr :HHHHHHHTT HHHHHHHHHTTT S SSH----HHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT GGGS S TTS : ExpBur :eeeebeeeeebeeeeebeebbbeeeeeebeeeee----eebeebbeeebeebeeeeeeebeeebeebeebbbeebeebbeebeeeeeeebeeeebeeeee: |