[pdbjlvh2]Protein Model on 4nnu_A

Protein Model on 4nnu_A_1 (TEMPLATE: 4nnu )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(HMGB1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [193 aa]	Transcription factor A, mitochondrial :TFAM_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4nnu_A_1 identity=28.6%

queryA         6:PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY---IPP-----------------KGET:  85
                :****    ***  *        *   ***     *       **       *    *   *    *  *         *                 *  *:
4nnu_A_1      43:PKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMT: 137
SecStr          :    ---  HHHHHHHHHHHHHHHHSTTS H--HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeee---eeeeeebbeebeeebeeeeeeeee--eebeeebbeebeeeeeeeeeeeeeeeeeeeeebeeebeebeeebeeeebeebeeeeeeeeeeeeeee:    

queryA        86:KKK-FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK----GKPDAAKKGV: 175
                :***       **** **      *     **  *        *   * * *     *  *   *      *              *  *      :
4nnu_A_1     138:KKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTI: 228
SecStr          :HHHHHHHTT       HHHHHHHHSSSS S SSH----HHHHHHHHHHHHT  TTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTT GGGS S  :    
ExpBur          :eeeebeeeeebeeeeebeebbbeeeeeeeeeeee----eebeebbeeebeebeeeeeeebeeebeebeebbeeebeebbeebeeeeeeebbeeee:

Protein Model on 4nnu_A_1 (TEMPLATE: 4nnu )

Input Residue Numbers for Focused Sites