Protein Model on 6erq_A_1_B_1
(TEMPLATE: 
6erq
)Protein Model on 6erq_A_1_B_1
(TEMPLATE: 6erq
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HMGB1_HUMAN) | A 1 (C) | polymer(polypeptide(L)) [192 aa] | Transcription factor A, mitochondrial :TFAM_HUMAN | |
| 2 | b | B 1 (D) | polymer(polydeoxyribonucleotide) [46 base] | Non-Template DNA | 14S 15S 16Y 17A(L) 39S(T) 42S(I) 43K(R) 46S(A) 49W 50K(R) 61E(Q) 64A(Y) 68K(W) 88K 96K 97R 99P(R) 102F(Y) 103F(N) 106C(V) 107S(A) 110R(F) 118P 126A(L) (identity: 33.3 %/29.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6erq_A_1 identity=29.3% |
queryA 4:GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY---IPP-----------------KG: 83
: **** *** * * *** * ** * * * * * * * :
6erq_A_1 8:SSPKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKA: 102
SecStr :HS --- HHHHHHHHHHHHHHHH TTS H--HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHS TTHHHHHHHHHHHHHHHHHH:
ExpBur :eeeeeb---eeeeeebbeebeeebeeeeeeeee--eebeeebbeebeeeeeeeeeeeeeeeeeeeeebeeebeebeeeeeeebeeeeeeeeeeeeeeeee:
Contact : bbbb b bb b bb b b b
queryA 84:ETKKK-FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY: 162
: **** **** ** * ** * * * * * * * * * :
6erq_A_1 103:MTKKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSW: 178
SecStr :HHHHHHHHHS HHHHHHHHHTTTS SSH----HHHHHHHHHHHHT TTTTHHHHHHHHHHHHHHHHHHHHH:
ExpBur :eeeeeeeeeeeeeeebeebeebbbeeeeeebeeeee----eebeeebeeebeebeeeebeebeeebeebeeebeeebeeb:
Contact : b bb b bb bb b b b
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[assembly_id:1]
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