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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HMGB1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [74 aa] | HIGH MOBILITY GROUP PROTEIN D :HMGD_DROME | |
2 | b | B 1 (B) | polymer(polydeoxyribonucleotide) [14 base] | DNA (5'-D(*CP*GP*AP*TP*AP*TP*TP*AP*AP*GP*AP*GP*CP*C)-3') | 97R 98P 99P(L) 103F(M) 121S(K) 122I(V) (identity: 33.3 %/44.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1e7j_A_1 identity=44.3% |
queryA 95:PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG: 166 :**** ** * * ** * ** *** ** * * ** * **** * * * *: 1e7j_A_1 5:PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEWEAKAAKAKDDYDRAVKEFEANG: 74 SecStr : HHHHHHHHSHHHHHHHTTT HHHHHHHHHHHHH--SSS SHHHHHHHHHHHHHHHHHHHHHHH : ExpBur :beeeeebeebbbeebeeebeeeeeeeeeeebeeebeeebe--eeeeeeebeeebeebeeeeeeeeeeeeeee: Contact : bbb b bb |