Protein Model on 2ak4_K_1_M_1
(TEMPLATE: 
2ak4
)Protein Model on 2ak4_K_1_M_1
(TEMPLATE: 2ak4
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | K 1 (K) | polymer(polypeptide(L)) [276 aa] | HLA-B35 variant | |
| 2 | b | M 1 (M) | polymer(polypeptide(L)) [13 aa] | EBV peptide LPEPLPQGQLTAY | 26L(M) 28Y 30H(Y) 83R 84E(N) 87S(I) 88A(F) 90D(T) 94I(T) 95F(Y) 98N(S) 101T(N) 102L 105Y 116L(I) 118W(R) 120H(Y) 137F(S) 164S(T) 167K 168S(W) 171A 173E(V) 176H(Q) 177Q(R) 180Y 184T(L) 188W 192Y (identity: 31.0 %/76.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2ak4_K_1 identity=76.8% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** * *********** ************* ****** ***** **** ***** * * * ** ************* * * *:
2ak4_K_1 1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYG: 100
SecStr : EEEEEEEEEE SSSS EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebebbbebebebeeeeeebebebebebbebebbebebeeeebebeeebebbeebeeebbeebbeebeeebeebbeebeebbeeeeeeeeeebebebebb:
Contact : b b b bb bb b bb b bb b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ****** *** * ******* ***** **** ****** * * ** ***** ***** *** ***** ********** ******:
2ak4_K_1 101:CDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQRRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEAT: 200
SecStr :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEEEETTEEE:
ExpBur :bbbbeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebbeeeeeeebbeebeeebeeebbeebeebbeebeeebeeeeebebebbeeeeeeeebb:
Contact : b b bb b b bb b b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** *** ************** **************************** * **** *:
2ak4_K_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE :
ExpBur :bbbebeebbbbebebebebeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebebebebeebebeeeebeee:
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[assembly_id:3]
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