Protein Model on 8tub_K_1_J_1 (TEMPLATE: 8tub )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:4]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAE_HUMAN) K 1 (J) polymer(polypeptide(L)) [275 aa] HLA class I histocompatibility antigen, B-7 alpha chain :1B07_HUMAN
2 b J 1 (I) polymer(polypeptide(L)) [99 aa] Beta-2-microglobulin :B2MG_HUMAN 29F 30H(Y) 31T 33V 46V 48Y 53Q 56R 69R 117Q 118W(S) 119M 136Q 137F(Y) 138A 140D 141G 143D 213H 223R 225W 252V 253E 254T 255R 256P 257A 258G 259D 263Q 265W (identity: 90.3 %/78.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8tub_K_1 identity=78.9%
queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** **************************** ******  ***** **** ***** *      **  *  ** **************** * *:
8tub_K_1       1:GSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbbbebebebeeeeeebebebebebbebebbebebeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebbeeeeeeeeeebebebebb:    
Contact         :       bbb b            b b    b  b            b                                               bbb  

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ********** ******   *   * ***  *****  *****  *** **  *    *****************:
8tub_K_1     101:CDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebbeebeeeebbeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :              bbb bb b                                                                     b        

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWK: 296
                :****************** ***  ************** **************************** * **** :
8tub_K_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEE SSSEEE   EE SSS EEEEEEEEEETT  TTEEEEEE TTSSS EEE   :    
ExpBur          :bbbbbeebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeee:    
Contact         : b b                          bbbbbbbb   b b                                                        


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