Protein Model on 8shi_D_1_F_1
(TEMPLATE: 
8shi
)Protein Model on 8shi_D_1_F_1
(TEMPLATE: 8shi
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DOWNLOAD: [sequence-replaced 3D model]
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [273 aa] | MHC class I antigen (Fragment) :F6IQM2_HUMAN | |
| 2 | b | F 1 (F) | polymer(polypeptide(L)) [9 aa] | VAL-ARG-SER-ARG-ARG-ABA-LEU-ARG-LEU | 26L(M) 28Y 30H(D) 45S 80Y 83R 84E 87S(K) 88A(Y) 90D(R) 91T(Q) 94I(A) 98N 101T(K) 105Y 118W 120H(Y) 137F(S) 164S(T) 167K 168S(W) 173E 176H(Q) 177Q(W) 180Y 188W 192Y (identity: 48.1 %/82.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8shi_D_1 identity=82.1% |
queryA 23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122
:*** ** * ************************** ****** ***** **** ******* ** ***** ********* ******** **:
8shi_D_1 3:SHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQWMYGC: 102
SecStr : EEEEEEEEE TTTSS EEEEEEEETTEEEEEEETTSSS EE STTTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT TTS EEEEEEEE:
ExpBur :ebbbebebebebeeeeeebebebbbebbeeebbebeeeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebbeeeeeeeeeebebebbbbb:
Contact : b b b b b bb bb bb b b b b b b
queryA 123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222
: ****** **** * ******* ********** ****** * * *** ***** ****** *** ***** * ********* *******:
8shi_D_1 103:DLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATL: 202
SecStr :EE TTSSEEEEEEEEEETTEEEEEE TTSS EEE STTHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHSS B B EEEE SSSEEEE:
ExpBur :bbbeeebeeebbbebbbeeeebbbbeeebeebeeebebbeebeeebeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebbb:
Contact : b b bb b bb b b b
queryA 223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
:***************** *** ********************************************* ****:
8shi_D_1 203:RCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW: 275
SecStr :EEEEEEEBSS EEEEEEESSSB TT EE EE SSS EEEEEEEEEETT TTEEEEEEETT SS EEE :
ExpBur :ebbbeebbbbebebebeeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:
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[assembly_id:2]
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