[pdbjlvh2]Protein Model on 8shi_D_1_E

Protein Model on 8shi_D_1_E_1 (TEMPLATE: 8shi )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [273 aa]	MHC class I antigen (Fragment) :F6IQM2_HUMAN
2	b		E 1 (E)	polymer(polypeptide(L)) [99 aa]	Beta-2-microglobulin :B2MG_HUMAN	29F 30H(D) 31T 33V 44I 46V 48Y 53Q 56R 69R 115T 117Q 118W 136Q 137F(S) 138A 140D 141G 223R 225W 252V 253E 255R 256P 257A 258G 259D 263Q 265W (identity: 93.1 %/82.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8shi_D_1 identity=82.1%

queryA        23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122
                :***  ** * ************************** ******  ***** **** *******      **  ***** ********* ******** **:
8shi_D_1       3:SHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQWMYGC: 102
SecStr          :  EEEEEEEEE  TTTSS EEEEEEEETTEEEEEEETTSSS   EE STTTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  TTS  EEEEEEEE:    
ExpBur          :ebbbebebebebeeeeeebebebbbebbeeebbebeeeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebbeeeeeeeeeebebebbbbb:    
Contact         :      bbb b          b b b    b  b            b                                             b bb    

queryA       123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222
                : ****** **** * *******  ********** ******   *   * ***  ***** ******  *** *****   * ********* *******:
8shi_D_1     103:DLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATL: 202
SecStr          :EE TTSSEEEEEEEEEETTEEEEEE TTSS EEE STTHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHSS B  B  EEEE  SSSEEEE:    
ExpBur          :bbbeeebeeebbbebbbeeeebbbbeeebeebeeebebbeebeeebeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebbb:    
Contact         :             bbb bb                                                                                 

queryA       223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
                :***************** ***  ********************************************* ****:
8shi_D_1     203:RCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW: 275
SecStr          :EEEEEEEBSS EEEEEEESSSB  TT EE   EE SSS EEEEEEEEEETT  TTEEEEEEETT SS EEE  :    
ExpBur          :ebbbeebbbbebebebeeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:    
Contact         :b b                          bb bbbbb   b b

Protein Model on 8shi_D_1_E_1 (TEMPLATE: 8shi )

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